Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01293

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2
1,432,162	+				+0.7
1,432,163	+				-2.6
1,432,171	-				-0.4
1,432,171	-				+0.9
1,432,171	-				+0.2
1,432,354	+				-0.5
1,432,363	+				+0.9
1,432,415	+				-1.3
1,432,430	-				-1.1
1,432,430	-				+0.5
1,432,471	+				-0.6
1,432,479	-				-0.5
1,432,479	-				+0.1
1,432,507	-				-0.5
1,432,592	+		MIT1002_01292	0.21	-0.4
1,432,592	+		MIT1002_01292	0.21	+0.2
1,432,617	-		MIT1002_01292	0.26	+2.0
1,432,617	-		MIT1002_01292	0.26	+0.2
1,432,673	+		MIT1002_01292	0.36	-0.4
1,432,682	+		MIT1002_01292	0.38	+0.1
1,432,712	-		MIT1002_01292	0.44	+0.0
1,432,784	-		MIT1002_01292	0.57	-0.2
1,432,784	-		MIT1002_01292	0.57	-0.6
1,432,808	+		MIT1002_01292	0.62	+0.4
1,432,884	-		MIT1002_01292	0.76	-0.7
1,432,890	+		MIT1002_01292	0.77	-0.1
1,432,908	-		MIT1002_01292	0.81	-0.4
1,432,969	+				+0.7
1,432,995	+				-1.0
1,433,003	-				-0.8
1,433,089	+				+0.9
1,433,164	-		MIT1002_01293	0.17	+1.2
1,433,164	-		MIT1002_01293	0.17	+1.9
1,433,280	-		MIT1002_01293	0.77	+0.9
1,433,290	-		MIT1002_01293	0.82	-0.0
1,433,290	-		MIT1002_01293	0.82	+0.4
1,433,610	+		MIT1002_01294	0.19	-1.1
1,433,610	+		MIT1002_01294	0.19	+1.0
1,433,610	+		MIT1002_01294	0.19	-0.3
1,433,618	-		MIT1002_01294	0.20	-0.8
1,433,650	+		MIT1002_01294	0.22	-0.1
1,433,655	+		MIT1002_01294	0.23	-0.9
1,433,657	-		MIT1002_01294	0.23	-0.4
1,433,700	+		MIT1002_01294	0.26	-0.2
1,433,751	-		MIT1002_01294	0.30	-1.3
1,433,805	+		MIT1002_01294	0.34	-2.3
1,433,811	-		MIT1002_01294	0.35	-2.1
1,433,824	+		MIT1002_01294	0.36	-0.7
1,433,832	-		MIT1002_01294	0.36	-0.1
1,433,906	-		MIT1002_01294	0.42	-0.2
1,433,936	+		MIT1002_01294	0.44	-2.7
1,433,953	-		MIT1002_01294	0.46	-2.1
1,433,955	+		MIT1002_01294	0.46	-1.0
1,433,962	+		MIT1002_01294	0.46	-0.5
1,433,970	-		MIT1002_01294	0.47	-0.4
1,434,002	-		MIT1002_01294	0.49	+0.4
1,434,038	-		MIT1002_01294	0.52	-2.0
1,434,047	-		MIT1002_01294	0.53	-1.2
1,434,061	+		MIT1002_01294	0.54	-1.6
1,434,128	+		MIT1002_01294	0.59	-0.4
1,434,138	+		MIT1002_01294	0.60	-0.2
1,434,138	+		MIT1002_01294	0.60	-1.8
1,434,146	-		MIT1002_01294	0.60	-3.0
1,434,213	+		MIT1002_01294	0.66	-1.3
1,434,244	+		MIT1002_01294	0.68	-0.2
1,434,261	+		MIT1002_01294	0.69	+0.3
1,434,269	-		MIT1002_01294	0.70	-0.3