Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01051

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2
1,160,260	+		MIT1002_01050	0.52	+0.5
1,160,309	-		MIT1002_01050	0.55	+0.2
1,160,335	+		MIT1002_01050	0.56	+0.3
1,160,335	+		MIT1002_01050	0.56	-0.4
1,160,374	+		MIT1002_01050	0.58	-0.2
1,160,400	+		MIT1002_01050	0.59	-1.0
1,160,435	+		MIT1002_01050	0.61	-0.3
1,160,443	-		MIT1002_01050	0.61	-0.2
1,160,448	-		MIT1002_01050	0.62	+1.4
1,160,522	-		MIT1002_01050	0.65	+3.1
1,160,588	+		MIT1002_01050	0.68	-0.3
1,160,593	+		MIT1002_01050	0.69	+0.3
1,160,593	+		MIT1002_01050	0.69	-0.8
1,160,593	+		MIT1002_01050	0.69	+1.4
1,160,593	+		MIT1002_01050	0.69	-1.3
1,160,596	-		MIT1002_01050	0.69	-0.5
1,160,601	-		MIT1002_01050	0.69	-1.9
1,160,601	-		MIT1002_01050	0.69	-1.1
1,160,603	+		MIT1002_01050	0.69	-0.1
1,160,656	-		MIT1002_01050	0.72	+1.1
1,160,674	+		MIT1002_01050	0.73	-1.5
1,160,728	-		MIT1002_01050	0.75	-1.1
1,160,749	+		MIT1002_01050	0.76	-3.0
1,160,757	-		MIT1002_01050	0.77	+1.4
1,160,758	+		MIT1002_01050	0.77	+0.3
1,160,764	-		MIT1002_01050	0.77	+2.2
1,160,767	-		MIT1002_01050	0.77	-2.4
1,160,767	-		MIT1002_01050	0.77	+0.6
1,160,787	+		MIT1002_01050	0.78	-1.5
1,160,805	+		MIT1002_01050	0.79	-0.6
1,160,833	+		MIT1002_01050	0.80	+0.0
1,160,857	+		MIT1002_01050	0.82	+1.1
1,160,945	+		MIT1002_01050	0.86	+0.5
1,160,984	+		MIT1002_01050	0.88	-0.4
1,161,010	-		MIT1002_01050	0.89	+1.2
1,161,098	+				-0.3
1,161,323	-				+0.1
1,161,323	-				-0.3
1,161,352	+				-1.0
1,161,365	-		MIT1002_01051	0.10	-0.3
1,161,401	+		MIT1002_01051	0.13	+0.5
1,161,409	-		MIT1002_01051	0.14	+0.4
1,161,419	-		MIT1002_01051	0.15	+0.7
1,161,450	+		MIT1002_01051	0.17	+1.4
1,161,459	+		MIT1002_01051	0.18	-1.5
1,161,461	-		MIT1002_01051	0.18	+1.0
1,161,467	-		MIT1002_01051	0.19	+1.8
1,161,467	-		MIT1002_01051	0.19	+0.3
1,161,471	-		MIT1002_01051	0.19	+0.2
1,161,473	+		MIT1002_01051	0.19	-0.2
1,161,473	+		MIT1002_01051	0.19	+0.2
1,161,473	+		MIT1002_01051	0.19	+1.7
1,161,473	+		MIT1002_01051	0.19	-0.1
1,161,473	+		MIT1002_01051	0.19	+1.1
1,161,481	-		MIT1002_01051	0.20	+0.1
1,161,481	-		MIT1002_01051	0.20	-2.1
1,161,481	-		MIT1002_01051	0.20	-2.9
1,161,481	-		MIT1002_01051	0.20	+0.0
1,161,481	-		MIT1002_01051	0.20	+0.8
1,161,537	-		MIT1002_01051	0.25	-0.4
1,161,571	-		MIT1002_01051	0.27	-2.6
1,161,575	+		MIT1002_01051	0.28	+1.9
1,161,633	+		MIT1002_01051	0.32	-0.9
1,161,678	+		MIT1002_01051	0.36	-0.0
1,161,680	-		MIT1002_01051	0.36	-0.0
1,161,783	+		MIT1002_01051	0.45	-0.2
1,161,791	-		MIT1002_01051	0.45	+0.3
1,161,803	+		MIT1002_01051	0.46	-0.2
1,161,811	-		MIT1002_01051	0.47	-0.3
1,161,837	+		MIT1002_01051	0.49	+0.0
1,161,837	+		MIT1002_01051	0.49	-1.3
1,161,837	+		MIT1002_01051	0.49	+0.7
1,161,840	-		MIT1002_01051	0.49	+1.8
1,161,845	-		MIT1002_01051	0.50	-0.1
1,161,845	-		MIT1002_01051	0.50	-0.3
1,161,948	+		MIT1002_01051	0.58	+0.2
1,161,989	+		MIT1002_01051	0.62	+0.0
1,162,004	+		MIT1002_01051	0.63	-4.4
1,162,123	-		MIT1002_01051	0.73	-0.3
1,162,210	+		MIT1002_01051	0.80	-0.4
1,162,228	+		MIT1002_01051	0.81	+0.5
1,162,228	+		MIT1002_01051	0.81	+0.0
1,162,278	+		MIT1002_01051	0.86	+0.6
1,162,284	-		MIT1002_01051	0.86	+0.1
1,162,284	-		MIT1002_01051	0.86	+1.0
1,162,530	+				-0.8
1,162,530	+				+0.9
1,162,537	+				+0.4
1,162,545	-				-0.8
1,162,547	+				-0.5
1,162,555	-				+0.8
1,162,555	-				+1.2
1,162,581	+				-0.6
1,162,581	+				+0.5
1,162,589	-				-0.5
1,162,598	+				+0.1
1,162,714	-		MIT1002_01052	0.26	+1.3
1,162,737	+		MIT1002_01052	0.29	+1.5
1,162,737	+		MIT1002_01052	0.29	+0.9
1,162,745	-		MIT1002_01052	0.31	+0.6
1,162,814	+		MIT1002_01052	0.42	+0.5
1,162,835	-		MIT1002_01052	0.45	+0.2
1,162,870	+		MIT1002_01052	0.51	-1.8
1,162,870	+		MIT1002_01052	0.51	-0.4
1,162,878	-		MIT1002_01052	0.52	-1.0
1,162,913	+		MIT1002_01052	0.58	-0.8
1,162,964	-		MIT1002_01052	0.66	-0.5
1,162,986	-		MIT1002_01052	0.70	-0.2
1,162,989	+		MIT1002_01052	0.70	+0.2
1,163,090	+		MIT1002_01052	0.86	-0.5
1,163,090	+		MIT1002_01052	0.86	+1.3
1,163,098	-		MIT1002_01052	0.88	-0.7
1,163,098	-		MIT1002_01052	0.88	+0.2
1,163,124	-				+0.4
1,163,174	+				-0.1
1,163,197	+				-0.9
1,163,235	-				+0.7
1,163,245	+				+0.9
1,163,245	+				-2.0
1,163,250	+				-0.4
1,163,253	-				-0.7
1,163,253	-				+0.4
1,163,278	+				+0.6
1,163,390	-				-1.3