Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS33760 and QEN71_RS33765 overlap by 4 nucleotides QEN71_RS33765 and QEN71_RS33770 are separated by 10 nucleotides QEN71_RS33770 and QEN71_RS33775 overlap by 65 nucleotides
QEN71_RS33760: QEN71_RS33760 - glutamine ABC transporter permease GlnP, at 894,951 to 895,607
_RS33760
QEN71_RS33765: QEN71_RS33765 - glutamine ABC transporter ATP-binding protein GlnQ, at 895,604 to 896,341
_RS33765
QEN71_RS33770: QEN71_RS33770 - C45 family peptidase, at 896,352 to 897,437
_RS33770
QEN71_RS33775: QEN71_RS33775 - MurR/RpiR family transcriptional regulator, at 897,373 to 898,371
_RS33775
Position (kb) 896
897
898 Strain fitness (log2 ratio) -2
-1
0
1 at 895.540 kb on - strand, within QEN71_RS33760 at 895.540 kb on - strand, within QEN71_RS33760 at 895.540 kb on - strand, within QEN71_RS33760 at 895.603 kb on + strand at 895.603 kb on + strand at 895.603 kb on + strand at 895.604 kb on - strand at 895.604 kb on - strand at 895.660 kb on + strand at 895.660 kb on + strand at 895.757 kb on + strand, within QEN71_RS33765 at 895.757 kb on - strand, within QEN71_RS33765 at 895.757 kb on - strand, within QEN71_RS33765 at 896.016 kb on - strand, within QEN71_RS33765 at 896.176 kb on + strand, within QEN71_RS33765 at 896.177 kb on - strand, within QEN71_RS33765 at 896.258 kb on - strand, within QEN71_RS33765 at 896.258 kb on - strand, within QEN71_RS33765 at 896.367 kb on + strand at 896.367 kb on + strand at 896.367 kb on + strand at 896.367 kb on + strand at 896.368 kb on - strand at 896.369 kb on + strand at 896.370 kb on - strand at 896.371 kb on + strand at 896.678 kb on + strand, within QEN71_RS33770 at 896.804 kb on + strand, within QEN71_RS33770 at 896.805 kb on - strand, within QEN71_RS33770 at 896.805 kb on - strand, within QEN71_RS33770 at 896.886 kb on - strand, within QEN71_RS33770 at 897.244 kb on - strand, within QEN71_RS33770 at 897.244 kb on - strand, within QEN71_RS33770 at 897.319 kb on + strand, within QEN71_RS33770 at 897.320 kb on - strand, within QEN71_RS33770 at 897.537 kb on + strand, within QEN71_RS33775 at 897.538 kb on - strand, within QEN71_RS33775 at 897.724 kb on + strand, within QEN71_RS33775 at 897.725 kb on - strand, within QEN71_RS33775 at 897.725 kb on - strand, within QEN71_RS33775 at 897.727 kb on - strand, within QEN71_RS33775 at 897.727 kb on - strand, within QEN71_RS33775 at 897.973 kb on + strand, within QEN71_RS33775 at 897.980 kb on + strand, within QEN71_RS33775 at 898.094 kb on - strand, within QEN71_RS33775 at 898.096 kb on - strand, within QEN71_RS33775 at 898.096 kb on - strand, within QEN71_RS33775 at 898.121 kb on + strand, within QEN71_RS33775 at 898.122 kb on - strand, within QEN71_RS33775 at 898.164 kb on + strand, within QEN71_RS33775 at 898.252 kb on + strand, within QEN71_RS33775 at 898.253 kb on - strand, within QEN71_RS33775 at 898.253 kb on - strand, within QEN71_RS33775 at 898.253 kb on - strand, within QEN71_RS33775 at 898.405 kb on - strand at 898.405 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 895,540 - QEN71_RS33760 0.90 +0.0 895,540 - QEN71_RS33760 0.90 +0.5 895,540 - QEN71_RS33760 0.90 -1.1 895,603 + +0.3 895,603 + +0.9 895,603 + -0.5 895,604 - +0.8 895,604 - -0.8 895,660 + +1.0 895,660 + +1.4 895,757 + QEN71_RS33765 0.21 -0.8 895,757 - QEN71_RS33765 0.21 -1.9 895,757 - QEN71_RS33765 0.21 -0.1 896,016 - QEN71_RS33765 0.56 +0.7 896,176 + QEN71_RS33765 0.78 +0.1 896,177 - QEN71_RS33765 0.78 -0.9 896,258 - QEN71_RS33765 0.89 +0.2 896,258 - QEN71_RS33765 0.89 +0.1 896,367 + -1.6 896,367 + -0.0 896,367 + -1.9 896,367 + -0.5 896,368 - -0.5 896,369 + +0.3 896,370 - -0.1 896,371 + -1.1 896,678 + QEN71_RS33770 0.30 -0.2 896,804 + QEN71_RS33770 0.42 -0.3 896,805 - QEN71_RS33770 0.42 +0.7 896,805 - QEN71_RS33770 0.42 +0.8 896,886 - QEN71_RS33770 0.49 -0.6 897,244 - QEN71_RS33770 0.82 -1.0 897,244 - QEN71_RS33770 0.82 -0.1 897,319 + QEN71_RS33770 0.89 +0.3 897,320 - QEN71_RS33770 0.89 -0.8 897,537 + QEN71_RS33775 0.16 -0.5 897,538 - QEN71_RS33775 0.17 -0.1 897,724 + QEN71_RS33775 0.35 -0.4 897,725 - QEN71_RS33775 0.35 -0.6 897,725 - QEN71_RS33775 0.35 -1.2 897,727 - QEN71_RS33775 0.35 -0.8 897,727 - QEN71_RS33775 0.35 -1.5 897,973 + QEN71_RS33775 0.60 -0.5 897,980 + QEN71_RS33775 0.61 -0.6 898,094 - QEN71_RS33775 0.72 -1.2 898,096 - QEN71_RS33775 0.72 -0.6 898,096 - QEN71_RS33775 0.72 -1.6 898,121 + QEN71_RS33775 0.75 -0.6 898,122 - QEN71_RS33775 0.75 -1.3 898,164 + QEN71_RS33775 0.79 -0.1 898,252 + QEN71_RS33775 0.88 -0.8 898,253 - QEN71_RS33775 0.88 -0.6 898,253 - QEN71_RS33775 0.88 -0.5 898,253 - QEN71_RS33775 0.88 -0.8 898,405 - +1.7 898,405 - +0.7
Or see this region's nucleotide sequence