Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS32955 and QEN71_RS32960 are separated by 151 nucleotides QEN71_RS32960 and QEN71_RS32965 are separated by 420 nucleotides QEN71_RS32965 and QEN71_RS32970 are separated by 27 nucleotides
QEN71_RS32955: QEN71_RS32955 - tautomerase family protein, at 722,364 to 722,570
_RS32955
QEN71_RS32960: QEN71_RS32960 - hypothetical protein, at 722,722 to 722,979
_RS32960
QEN71_RS32965: QEN71_RS32965 - AI-2E family transporter, at 723,400 to 724,503
_RS32965
QEN71_RS32970: QEN71_RS32970 - efflux transporter outer membrane subunit, at 724,531 to 726,072
_RS32970
Position (kb) 723
724
725 Strain fitness (log2 ratio) -2
-1
0
1 at 722.656 kb on + strand at 722.656 kb on + strand at 722.656 kb on + strand at 722.657 kb on - strand at 722.663 kb on + strand at 722.664 kb on - strand at 722.974 kb on + strand at 722.975 kb on - strand at 722.990 kb on + strand at 722.990 kb on + strand at 722.990 kb on + strand at 722.991 kb on - strand at 722.991 kb on - strand at 723.059 kb on - strand at 723.087 kb on + strand at 723.183 kb on + strand at 723.201 kb on - strand at 723.204 kb on - strand at 723.661 kb on + strand, within QEN71_RS32965 at 723.661 kb on + strand, within QEN71_RS32965 at 723.662 kb on - strand, within QEN71_RS32965 at 725.074 kb on + strand, within QEN71_RS32970 at 725.074 kb on + strand, within QEN71_RS32970 at 725.074 kb on + strand, within QEN71_RS32970 at 725.075 kb on - strand, within QEN71_RS32970 at 725.075 kb on - strand, within QEN71_RS32970 at 725.219 kb on - strand, within QEN71_RS32970 at 725.219 kb on - strand, within QEN71_RS32970
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 722,656 + -0.5 722,656 + -0.2 722,656 + -0.2 722,657 - +1.0 722,663 + -2.3 722,664 - -0.0 722,974 + -0.2 722,975 - -0.5 722,990 + +0.4 722,990 + +0.2 722,990 + +0.2 722,991 - +0.4 722,991 - +0.5 723,059 - +0.5 723,087 + +0.6 723,183 + -0.3 723,201 - +0.3 723,204 - -1.1 723,661 + QEN71_RS32965 0.24 -0.6 723,661 + QEN71_RS32965 0.24 -0.8 723,662 - QEN71_RS32965 0.24 +0.0 725,074 + QEN71_RS32970 0.35 +0.4 725,074 + QEN71_RS32970 0.35 -0.3 725,074 + QEN71_RS32970 0.35 -0.1 725,075 - QEN71_RS32970 0.35 -0.3 725,075 - QEN71_RS32970 0.35 +0.8 725,219 - QEN71_RS32970 0.45 +0.5 725,219 - QEN71_RS32970 0.45 +0.0
Or see this region's nucleotide sequence