Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS26110 and QEN71_RS26115 are separated by 126 nucleotides QEN71_RS26115 and QEN71_RS26120 are separated by 151 nucleotides
QEN71_RS26110: QEN71_RS26110 - bifunctional aspartate transaminase/aspartate 4-decarboxylase, at 5,821,482 to 5,823,128
_RS26110
QEN71_RS26115: QEN71_RS26115 - aspartate-alanine antiporter, at 5,823,255 to 5,824,940
_RS26115
QEN71_RS26120: QEN71_RS26120 - aspartate-alanine antiporter, at 5,825,092 to 5,826,780
_RS26120
Position (kb) 5823
5824
5825 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5822.299 kb on + strand, within QEN71_RS26110 at 5822.299 kb on + strand, within QEN71_RS26110 at 5822.299 kb on + strand, within QEN71_RS26110 at 5822.300 kb on - strand, within QEN71_RS26110 at 5822.300 kb on - strand, within QEN71_RS26110 at 5822.373 kb on - strand, within QEN71_RS26110 at 5822.418 kb on - strand, within QEN71_RS26110 at 5822.418 kb on - strand, within QEN71_RS26110 at 5822.418 kb on - strand, within QEN71_RS26110 at 5822.458 kb on + strand, within QEN71_RS26110 at 5822.485 kb on + strand, within QEN71_RS26110 at 5822.486 kb on - strand, within QEN71_RS26110 at 5822.486 kb on - strand, within QEN71_RS26110 at 5822.566 kb on + strand, within QEN71_RS26110 at 5822.566 kb on + strand, within QEN71_RS26110 at 5822.566 kb on + strand, within QEN71_RS26110 at 5822.566 kb on + strand, within QEN71_RS26110 at 5822.566 kb on + strand, within QEN71_RS26110 at 5822.566 kb on + strand, within QEN71_RS26110 at 5822.566 kb on + strand, within QEN71_RS26110 at 5822.566 kb on + strand, within QEN71_RS26110 at 5822.566 kb on + strand, within QEN71_RS26110 at 5822.566 kb on + strand, within QEN71_RS26110 at 5822.567 kb on - strand, within QEN71_RS26110 at 5822.567 kb on - strand, within QEN71_RS26110 at 5822.567 kb on - strand, within QEN71_RS26110 at 5822.567 kb on - strand, within QEN71_RS26110 at 5822.567 kb on - strand, within QEN71_RS26110 at 5822.626 kb on + strand, within QEN71_RS26110 at 5822.626 kb on + strand, within QEN71_RS26110 at 5822.626 kb on + strand, within QEN71_RS26110 at 5822.626 kb on + strand, within QEN71_RS26110 at 5822.626 kb on + strand, within QEN71_RS26110 at 5822.627 kb on - strand, within QEN71_RS26110 at 5822.627 kb on - strand, within QEN71_RS26110 at 5822.653 kb on + strand, within QEN71_RS26110 at 5822.704 kb on + strand, within QEN71_RS26110 at 5822.737 kb on + strand, within QEN71_RS26110 at 5822.737 kb on + strand, within QEN71_RS26110 at 5822.737 kb on + strand, within QEN71_RS26110 at 5822.737 kb on + strand, within QEN71_RS26110 at 5822.737 kb on + strand, within QEN71_RS26110 at 5822.738 kb on - strand, within QEN71_RS26110 at 5822.738 kb on - strand, within QEN71_RS26110 at 5822.779 kb on + strand, within QEN71_RS26110 at 5822.779 kb on + strand, within QEN71_RS26110 at 5822.779 kb on + strand, within QEN71_RS26110 at 5822.779 kb on + strand, within QEN71_RS26110 at 5822.779 kb on + strand, within QEN71_RS26110 at 5822.780 kb on - strand, within QEN71_RS26110 at 5822.780 kb on - strand, within QEN71_RS26110 at 5822.780 kb on - strand, within QEN71_RS26110 at 5822.780 kb on - strand, within QEN71_RS26110 at 5822.780 kb on - strand, within QEN71_RS26110 at 5822.900 kb on - strand, within QEN71_RS26110 at 5822.900 kb on - strand, within QEN71_RS26110 at 5823.104 kb on + strand at 5823.104 kb on + strand at 5823.105 kb on - strand at 5823.253 kb on - strand at 5823.313 kb on + strand at 5823.433 kb on + strand, within QEN71_RS26115 at 5823.445 kb on + strand, within QEN71_RS26115 at 5823.446 kb on - strand, within QEN71_RS26115 at 5823.627 kb on + strand, within QEN71_RS26115 at 5823.627 kb on + strand, within QEN71_RS26115 at 5823.634 kb on + strand, within QEN71_RS26115 at 5823.634 kb on + strand, within QEN71_RS26115 at 5823.634 kb on + strand, within QEN71_RS26115 at 5823.634 kb on + strand, within QEN71_RS26115 at 5823.634 kb on + strand, within QEN71_RS26115 at 5823.635 kb on - strand, within QEN71_RS26115 at 5823.635 kb on - strand, within QEN71_RS26115 at 5823.635 kb on - strand, within QEN71_RS26115 at 5823.635 kb on - strand, within QEN71_RS26115 at 5823.777 kb on - strand, within QEN71_RS26115 at 5823.777 kb on - strand, within QEN71_RS26115 at 5823.777 kb on - strand, within QEN71_RS26115 at 5823.777 kb on - strand, within QEN71_RS26115 at 5823.778 kb on + strand, within QEN71_RS26115 at 5823.778 kb on + strand, within QEN71_RS26115 at 5823.778 kb on + strand, within QEN71_RS26115 at 5823.778 kb on + strand, within QEN71_RS26115 at 5823.778 kb on + strand, within QEN71_RS26115 at 5823.778 kb on + strand, within QEN71_RS26115 at 5823.778 kb on + strand, within QEN71_RS26115 at 5823.778 kb on + strand, within QEN71_RS26115 at 5823.778 kb on + strand, within QEN71_RS26115 at 5823.778 kb on + strand, within QEN71_RS26115 at 5823.778 kb on + strand, within QEN71_RS26115 at 5823.779 kb on - strand, within QEN71_RS26115 at 5823.779 kb on - strand, within QEN71_RS26115 at 5823.779 kb on - strand, within QEN71_RS26115 at 5823.779 kb on - strand, within QEN71_RS26115 at 5823.779 kb on - strand, within QEN71_RS26115 at 5823.779 kb on - strand, within QEN71_RS26115 at 5823.779 kb on - strand, within QEN71_RS26115 at 5823.779 kb on - strand, within QEN71_RS26115 at 5823.779 kb on - strand, within QEN71_RS26115 at 5823.779 kb on - strand, within QEN71_RS26115 at 5823.779 kb on - strand, within QEN71_RS26115 at 5823.779 kb on - strand, within QEN71_RS26115 at 5823.779 kb on - strand, within QEN71_RS26115 at 5823.779 kb on - strand, within QEN71_RS26115 at 5823.779 kb on - strand, within QEN71_RS26115 at 5823.779 kb on - strand, within QEN71_RS26115 at 5823.779 kb on - strand, within QEN71_RS26115 at 5823.814 kb on + strand, within QEN71_RS26115 at 5823.815 kb on - strand, within QEN71_RS26115 at 5823.862 kb on + strand, within QEN71_RS26115 at 5823.863 kb on - strand, within QEN71_RS26115 at 5823.863 kb on - strand, within QEN71_RS26115 at 5823.863 kb on - strand, within QEN71_RS26115 at 5823.863 kb on - strand, within QEN71_RS26115 at 5823.863 kb on - strand, within QEN71_RS26115 at 5823.863 kb on - strand, within QEN71_RS26115 at 5823.943 kb on + strand, within QEN71_RS26115 at 5823.944 kb on - strand, within QEN71_RS26115 at 5824.444 kb on + strand, within QEN71_RS26115 at 5824.444 kb on + strand, within QEN71_RS26115 at 5824.444 kb on + strand, within QEN71_RS26115 at 5824.444 kb on + strand, within QEN71_RS26115 at 5824.444 kb on + strand, within QEN71_RS26115 at 5824.444 kb on + strand, within QEN71_RS26115 at 5824.444 kb on + strand, within QEN71_RS26115 at 5824.444 kb on + strand, within QEN71_RS26115 at 5824.444 kb on + strand, within QEN71_RS26115 at 5824.444 kb on + strand, within QEN71_RS26115 at 5824.444 kb on + strand, within QEN71_RS26115 at 5824.445 kb on - strand, within QEN71_RS26115 at 5824.445 kb on - strand, within QEN71_RS26115 at 5824.445 kb on - strand, within QEN71_RS26115 at 5824.445 kb on - strand, within QEN71_RS26115 at 5824.457 kb on - strand, within QEN71_RS26115 at 5824.732 kb on + strand, within QEN71_RS26115 at 5824.733 kb on - strand, within QEN71_RS26115 at 5824.733 kb on - strand, within QEN71_RS26115 at 5824.733 kb on - strand, within QEN71_RS26115 at 5824.867 kb on + strand at 5824.867 kb on + strand at 5824.867 kb on + strand at 5824.867 kb on + strand at 5824.867 kb on + strand at 5824.867 kb on + strand at 5824.867 kb on + strand at 5824.868 kb on - strand at 5824.868 kb on - strand at 5824.868 kb on - strand at 5824.868 kb on - strand at 5824.868 kb on - strand at 5824.868 kb on - strand at 5824.868 kb on - strand at 5824.868 kb on - strand at 5824.870 kb on + strand at 5824.871 kb on - strand at 5824.899 kb on + strand at 5824.899 kb on + strand at 5824.899 kb on + strand at 5824.900 kb on - strand at 5824.900 kb on - strand at 5824.900 kb on - strand at 5824.900 kb on - strand at 5824.929 kb on + strand at 5824.930 kb on - strand at 5824.989 kb on + strand at 5824.989 kb on + strand at 5824.989 kb on + strand at 5824.989 kb on + strand at 5824.990 kb on - strand at 5824.990 kb on - strand at 5824.990 kb on - strand at 5824.990 kb on - strand at 5824.990 kb on - strand at 5824.990 kb on - strand at 5824.990 kb on - strand at 5824.990 kb on - strand at 5824.990 kb on - strand at 5824.990 kb on - strand at 5825.165 kb on + strand at 5825.165 kb on + strand at 5825.165 kb on + strand at 5825.165 kb on + strand at 5825.165 kb on + strand at 5825.166 kb on - strand at 5825.166 kb on - strand at 5825.369 kb on + strand, within QEN71_RS26120 at 5825.663 kb on + strand, within QEN71_RS26120 at 5825.664 kb on - strand, within QEN71_RS26120 at 5825.664 kb on - strand, within QEN71_RS26120 at 5825.664 kb on - strand, within QEN71_RS26120 at 5825.664 kb on - strand, within QEN71_RS26120 at 5825.664 kb on - strand, within QEN71_RS26120 at 5825.686 kb on + strand, within QEN71_RS26120 at 5825.686 kb on + strand, within QEN71_RS26120 at 5825.792 kb on + strand, within QEN71_RS26120 at 5825.792 kb on + strand, within QEN71_RS26120 at 5825.792 kb on + strand, within QEN71_RS26120 at 5825.792 kb on + strand, within QEN71_RS26120 at 5825.792 kb on + strand, within QEN71_RS26120 at 5825.792 kb on + strand, within QEN71_RS26120 at 5825.792 kb on + strand, within QEN71_RS26120 at 5825.793 kb on - strand, within QEN71_RS26120 at 5825.793 kb on - strand, within QEN71_RS26120 at 5825.793 kb on - strand, within QEN71_RS26120 at 5825.793 kb on - strand, within QEN71_RS26120 at 5825.793 kb on - strand, within QEN71_RS26120 at 5825.793 kb on - strand, within QEN71_RS26120 at 5825.793 kb on - strand, within QEN71_RS26120 at 5825.793 kb on - strand, within QEN71_RS26120
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 5,822,299 + QEN71_RS26110 0.50 +0.1 5,822,299 + QEN71_RS26110 0.50 -0.7 5,822,299 + QEN71_RS26110 0.50 +0.6 5,822,300 - QEN71_RS26110 0.50 -1.7 5,822,300 - QEN71_RS26110 0.50 -0.2 5,822,373 - QEN71_RS26110 0.54 +0.2 5,822,418 - QEN71_RS26110 0.57 -0.2 5,822,418 - QEN71_RS26110 0.57 -0.2 5,822,418 - QEN71_RS26110 0.57 +0.3 5,822,458 + QEN71_RS26110 0.59 -0.2 5,822,485 + QEN71_RS26110 0.61 -0.5 5,822,486 - QEN71_RS26110 0.61 -0.9 5,822,486 - QEN71_RS26110 0.61 -0.8 5,822,566 + QEN71_RS26110 0.66 -0.0 5,822,566 + QEN71_RS26110 0.66 -0.5 5,822,566 + QEN71_RS26110 0.66 +1.1 5,822,566 + QEN71_RS26110 0.66 +0.6 5,822,566 + QEN71_RS26110 0.66 +0.5 5,822,566 + QEN71_RS26110 0.66 -0.4 5,822,566 + QEN71_RS26110 0.66 +0.6 5,822,566 + QEN71_RS26110 0.66 -0.4 5,822,566 + QEN71_RS26110 0.66 +0.0 5,822,566 + QEN71_RS26110 0.66 -0.8 5,822,567 - QEN71_RS26110 0.66 -0.2 5,822,567 - QEN71_RS26110 0.66 -1.0 5,822,567 - QEN71_RS26110 0.66 +1.8 5,822,567 - QEN71_RS26110 0.66 -0.3 5,822,567 - QEN71_RS26110 0.66 +0.4 5,822,626 + QEN71_RS26110 0.69 +1.6 5,822,626 + QEN71_RS26110 0.69 -1.5 5,822,626 + QEN71_RS26110 0.69 +0.2 5,822,626 + QEN71_RS26110 0.69 -1.4 5,822,626 + QEN71_RS26110 0.69 +0.1 5,822,627 - QEN71_RS26110 0.70 -0.2 5,822,627 - QEN71_RS26110 0.70 -0.8 5,822,653 + QEN71_RS26110 0.71 -0.3 5,822,704 + QEN71_RS26110 0.74 +0.8 5,822,737 + QEN71_RS26110 0.76 -0.2 5,822,737 + QEN71_RS26110 0.76 +0.5 5,822,737 + QEN71_RS26110 0.76 -0.8 5,822,737 + QEN71_RS26110 0.76 +0.8 5,822,737 + QEN71_RS26110 0.76 -3.1 5,822,738 - QEN71_RS26110 0.76 +0.7 5,822,738 - QEN71_RS26110 0.76 +0.6 5,822,779 + QEN71_RS26110 0.79 -0.1 5,822,779 + QEN71_RS26110 0.79 +0.8 5,822,779 + QEN71_RS26110 0.79 -0.7 5,822,779 + QEN71_RS26110 0.79 -0.6 5,822,779 + QEN71_RS26110 0.79 +0.4 5,822,780 - QEN71_RS26110 0.79 +0.8 5,822,780 - QEN71_RS26110 0.79 -1.5 5,822,780 - QEN71_RS26110 0.79 -1.9 5,822,780 - QEN71_RS26110 0.79 +1.0 5,822,780 - QEN71_RS26110 0.79 +0.3 5,822,900 - QEN71_RS26110 0.86 -0.2 5,822,900 - QEN71_RS26110 0.86 -0.4 5,823,104 + -1.1 5,823,104 + -0.2 5,823,105 - +0.6 5,823,253 - -0.1 5,823,313 + +0.8 5,823,433 + QEN71_RS26115 0.11 -0.6 5,823,445 + QEN71_RS26115 0.11 -0.3 5,823,446 - QEN71_RS26115 0.11 +0.7 5,823,627 + QEN71_RS26115 0.22 +1.3 5,823,627 + QEN71_RS26115 0.22 +1.5 5,823,634 + QEN71_RS26115 0.22 -0.9 5,823,634 + QEN71_RS26115 0.22 -2.1 5,823,634 + QEN71_RS26115 0.22 +1.5 5,823,634 + QEN71_RS26115 0.22 -0.2 5,823,634 + QEN71_RS26115 0.22 -0.2 5,823,635 - QEN71_RS26115 0.23 +0.2 5,823,635 - QEN71_RS26115 0.23 +0.3 5,823,635 - QEN71_RS26115 0.23 -1.2 5,823,635 - QEN71_RS26115 0.23 -1.2 5,823,777 - QEN71_RS26115 0.31 -0.8 5,823,777 - QEN71_RS26115 0.31 +0.3 5,823,777 - QEN71_RS26115 0.31 +1.2 5,823,777 - QEN71_RS26115 0.31 +0.6 5,823,778 + QEN71_RS26115 0.31 -0.7 5,823,778 + QEN71_RS26115 0.31 -0.8 5,823,778 + QEN71_RS26115 0.31 +1.8 5,823,778 + QEN71_RS26115 0.31 -0.5 5,823,778 + QEN71_RS26115 0.31 -0.2 5,823,778 + QEN71_RS26115 0.31 +1.4 5,823,778 + QEN71_RS26115 0.31 +1.5 5,823,778 + QEN71_RS26115 0.31 -0.8 5,823,778 + QEN71_RS26115 0.31 +0.4 5,823,778 + QEN71_RS26115 0.31 +0.3 5,823,778 + QEN71_RS26115 0.31 -0.5 5,823,779 - QEN71_RS26115 0.31 +0.2 5,823,779 - QEN71_RS26115 0.31 +0.2 5,823,779 - QEN71_RS26115 0.31 -1.7 5,823,779 - QEN71_RS26115 0.31 +1.1 5,823,779 - QEN71_RS26115 0.31 -0.5 5,823,779 - QEN71_RS26115 0.31 -0.7 5,823,779 - QEN71_RS26115 0.31 +0.2 5,823,779 - QEN71_RS26115 0.31 +0.9 5,823,779 - QEN71_RS26115 0.31 +0.3 5,823,779 - QEN71_RS26115 0.31 -0.8 5,823,779 - QEN71_RS26115 0.31 +1.1 5,823,779 - QEN71_RS26115 0.31 +0.5 5,823,779 - QEN71_RS26115 0.31 +0.6 5,823,779 - QEN71_RS26115 0.31 -0.5 5,823,779 - QEN71_RS26115 0.31 -0.2 5,823,779 - QEN71_RS26115 0.31 +0.2 5,823,779 - QEN71_RS26115 0.31 +0.8 5,823,814 + QEN71_RS26115 0.33 +0.8 5,823,815 - QEN71_RS26115 0.33 -0.9 5,823,862 + QEN71_RS26115 0.36 -0.5 5,823,863 - QEN71_RS26115 0.36 +0.3 5,823,863 - QEN71_RS26115 0.36 -1.7 5,823,863 - QEN71_RS26115 0.36 -0.1 5,823,863 - QEN71_RS26115 0.36 -0.3 5,823,863 - QEN71_RS26115 0.36 -0.2 5,823,863 - QEN71_RS26115 0.36 +0.1 5,823,943 + QEN71_RS26115 0.41 -0.3 5,823,944 - QEN71_RS26115 0.41 -0.2 5,824,444 + QEN71_RS26115 0.71 -0.8 5,824,444 + QEN71_RS26115 0.71 +0.6 5,824,444 + QEN71_RS26115 0.71 -0.5 5,824,444 + QEN71_RS26115 0.71 +0.7 5,824,444 + QEN71_RS26115 0.71 -1.0 5,824,444 + QEN71_RS26115 0.71 -0.5 5,824,444 + QEN71_RS26115 0.71 -1.1 5,824,444 + QEN71_RS26115 0.71 -1.2 5,824,444 + QEN71_RS26115 0.71 -0.1 5,824,444 + QEN71_RS26115 0.71 -0.2 5,824,444 + QEN71_RS26115 0.71 +1.0 5,824,445 - QEN71_RS26115 0.71 -0.9 5,824,445 - QEN71_RS26115 0.71 -0.6 5,824,445 - QEN71_RS26115 0.71 +0.2 5,824,445 - QEN71_RS26115 0.71 -0.1 5,824,457 - QEN71_RS26115 0.71 -0.3 5,824,732 + QEN71_RS26115 0.88 +2.4 5,824,733 - QEN71_RS26115 0.88 +1.1 5,824,733 - QEN71_RS26115 0.88 -0.4 5,824,733 - QEN71_RS26115 0.88 -0.2 5,824,867 + +0.1 5,824,867 + -1.4 5,824,867 + -0.2 5,824,867 + -0.4 5,824,867 + -0.3 5,824,867 + -0.7 5,824,867 + -0.1 5,824,868 - -1.5 5,824,868 - -0.8 5,824,868 - +0.1 5,824,868 - +0.7 5,824,868 - -0.7 5,824,868 - +2.0 5,824,868 - -0.2 5,824,868 - +0.1 5,824,870 + +0.8 5,824,871 - +1.0 5,824,899 + +0.2 5,824,899 + -0.4 5,824,899 + -1.0 5,824,900 - -0.5 5,824,900 - -1.9 5,824,900 - +2.1 5,824,900 - -0.8 5,824,929 + +0.1 5,824,930 - +0.3 5,824,989 + +0.5 5,824,989 + -0.2 5,824,989 + +0.4 5,824,989 + -0.3 5,824,990 - -1.7 5,824,990 - +0.8 5,824,990 - +0.3 5,824,990 - -0.7 5,824,990 - +1.4 5,824,990 - -0.1 5,824,990 - +0.8 5,824,990 - +0.7 5,824,990 - -0.0 5,824,990 - +0.7 5,825,165 + +0.4 5,825,165 + -0.2 5,825,165 + -0.2 5,825,165 + -2.2 5,825,165 + +0.0 5,825,166 - +0.4 5,825,166 - -0.0 5,825,369 + QEN71_RS26120 0.16 +0.5 5,825,663 + QEN71_RS26120 0.34 +0.8 5,825,664 - QEN71_RS26120 0.34 -0.4 5,825,664 - QEN71_RS26120 0.34 -1.1 5,825,664 - QEN71_RS26120 0.34 +1.0 5,825,664 - QEN71_RS26120 0.34 -0.9 5,825,664 - QEN71_RS26120 0.34 -0.2 5,825,686 + QEN71_RS26120 0.35 +1.1 5,825,686 + QEN71_RS26120 0.35 -0.5 5,825,792 + QEN71_RS26120 0.41 +0.6 5,825,792 + QEN71_RS26120 0.41 +1.1 5,825,792 + QEN71_RS26120 0.41 -0.2 5,825,792 + QEN71_RS26120 0.41 +0.0 5,825,792 + QEN71_RS26120 0.41 +0.5 5,825,792 + QEN71_RS26120 0.41 -1.5 5,825,792 + QEN71_RS26120 0.41 -0.9 5,825,793 - QEN71_RS26120 0.42 -1.0 5,825,793 - QEN71_RS26120 0.42 +1.1 5,825,793 - QEN71_RS26120 0.42 +0.6 5,825,793 - QEN71_RS26120 0.42 -0.5 5,825,793 - QEN71_RS26120 0.42 -0.8 5,825,793 - QEN71_RS26120 0.42 +0.4 5,825,793 - QEN71_RS26120 0.42 -0.8 5,825,793 - QEN71_RS26120 0.42 +1.2
Or see this region's nucleotide sequence