Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS19000 and QEN71_RS19005 are separated by 89 nucleotides QEN71_RS19005 and QEN71_RS19010 are separated by 170 nucleotides QEN71_RS19010 and QEN71_RS19015 are separated by 20 nucleotides QEN71_RS19015 and QEN71_RS19020 are separated by 594 nucleotides
QEN71_RS19000: QEN71_RS19000 - response regulator, at 4,228,735 to 4,229,130
_RS19000
QEN71_RS19005: QEN71_RS19005 - response regulator, at 4,229,220 to 4,229,576
_RS19005
QEN71_RS19010: QEN71_RS19010 - ATP-binding protein, at 4,229,747 to 4,231,210
_RS19010
QEN71_RS19015: QEN71_RS19015 - hypothetical protein, at 4,231,231 to 4,231,440
_RS19015
QEN71_RS19020: QEN71_RS19020 - sigma-54 dependent transcriptional regulator, at 4,232,035 to 4,233,441
_RS19020
Position (kb)
4229
4230
4231
4232 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4228.811 kb on - strand, within QEN71_RS19000 at 4228.812 kb on + strand, within QEN71_RS19000 at 4228.812 kb on + strand, within QEN71_RS19000 at 4228.812 kb on + strand, within QEN71_RS19000 at 4228.813 kb on - strand, within QEN71_RS19000 at 4228.813 kb on - strand, within QEN71_RS19000 at 4228.813 kb on - strand, within QEN71_RS19000 at 4228.813 kb on - strand, within QEN71_RS19000 at 4228.813 kb on - strand, within QEN71_RS19000 at 4228.813 kb on - strand, within QEN71_RS19000 at 4228.813 kb on - strand, within QEN71_RS19000 at 4228.813 kb on - strand, within QEN71_RS19000 at 4228.955 kb on + strand, within QEN71_RS19000 at 4228.955 kb on + strand, within QEN71_RS19000 at 4228.955 kb on + strand, within QEN71_RS19000 at 4228.955 kb on + strand, within QEN71_RS19000 at 4228.955 kb on + strand, within QEN71_RS19000 at 4228.956 kb on - strand, within QEN71_RS19000 at 4228.956 kb on - strand, within QEN71_RS19000 at 4228.956 kb on - strand, within QEN71_RS19000 at 4229.286 kb on + strand, within QEN71_RS19005 at 4229.286 kb on + strand, within QEN71_RS19005 at 4229.286 kb on + strand, within QEN71_RS19005 at 4229.286 kb on + strand, within QEN71_RS19005 at 4229.287 kb on - strand, within QEN71_RS19005 at 4229.287 kb on - strand, within QEN71_RS19005 at 4229.302 kb on + strand, within QEN71_RS19005 at 4229.302 kb on + strand, within QEN71_RS19005 at 4229.302 kb on + strand, within QEN71_RS19005 at 4229.302 kb on + strand, within QEN71_RS19005 at 4229.302 kb on + strand, within QEN71_RS19005 at 4229.302 kb on + strand, within QEN71_RS19005 at 4229.302 kb on + strand, within QEN71_RS19005 at 4229.303 kb on - strand, within QEN71_RS19005 at 4229.455 kb on + strand, within QEN71_RS19005 at 4229.455 kb on + strand, within QEN71_RS19005 at 4229.456 kb on - strand, within QEN71_RS19005 at 4229.462 kb on + strand, within QEN71_RS19005 at 4229.462 kb on + strand, within QEN71_RS19005 at 4229.462 kb on + strand, within QEN71_RS19005 at 4229.462 kb on + strand, within QEN71_RS19005 at 4229.462 kb on + strand, within QEN71_RS19005 at 4229.462 kb on + strand, within QEN71_RS19005 at 4229.463 kb on - strand, within QEN71_RS19005 at 4229.463 kb on - strand, within QEN71_RS19005 at 4229.463 kb on - strand, within QEN71_RS19005 at 4229.463 kb on - strand, within QEN71_RS19005 at 4229.463 kb on - strand, within QEN71_RS19005 at 4229.472 kb on + strand, within QEN71_RS19005 at 4229.472 kb on + strand, within QEN71_RS19005 at 4229.473 kb on - strand, within QEN71_RS19005 at 4229.492 kb on + strand, within QEN71_RS19005 at 4229.564 kb on + strand at 4229.565 kb on - strand at 4229.565 kb on - strand at 4229.610 kb on + strand at 4229.728 kb on - strand at 4229.811 kb on + strand at 4229.812 kb on - strand at 4229.812 kb on - strand at 4229.812 kb on - strand at 4229.812 kb on - strand at 4229.812 kb on - strand at 4230.808 kb on + strand, within QEN71_RS19010 at 4230.836 kb on - strand, within QEN71_RS19010 at 4231.023 kb on + strand, within QEN71_RS19010 at 4231.023 kb on + strand, within QEN71_RS19010 at 4231.024 kb on - strand, within QEN71_RS19010 at 4231.024 kb on - strand, within QEN71_RS19010 at 4231.024 kb on - strand, within QEN71_RS19010 at 4231.203 kb on + strand at 4231.233 kb on - strand at 4231.408 kb on + strand, within QEN71_RS19015 at 4231.431 kb on + strand at 4231.493 kb on + strand at 4231.493 kb on + strand at 4231.494 kb on - strand at 4231.494 kb on - strand at 4231.688 kb on + strand at 4231.943 kb on - strand at 4231.943 kb on - strand at 4232.130 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 4,228,811 - QEN71_RS19000 0.19 -0.3 4,228,812 + QEN71_RS19000 0.19 -0.5 4,228,812 + QEN71_RS19000 0.19 -0.0 4,228,812 + QEN71_RS19000 0.19 -2.8 4,228,813 - QEN71_RS19000 0.20 -0.8 4,228,813 - QEN71_RS19000 0.20 +0.8 4,228,813 - QEN71_RS19000 0.20 +0.1 4,228,813 - QEN71_RS19000 0.20 +0.7 4,228,813 - QEN71_RS19000 0.20 +2.0 4,228,813 - QEN71_RS19000 0.20 -0.7 4,228,813 - QEN71_RS19000 0.20 +0.7 4,228,813 - QEN71_RS19000 0.20 -0.1 4,228,955 + QEN71_RS19000 0.56 +0.4 4,228,955 + QEN71_RS19000 0.56 +0.7 4,228,955 + QEN71_RS19000 0.56 -0.9 4,228,955 + QEN71_RS19000 0.56 -0.1 4,228,955 + QEN71_RS19000 0.56 +0.5 4,228,956 - QEN71_RS19000 0.56 -0.1 4,228,956 - QEN71_RS19000 0.56 -0.2 4,228,956 - QEN71_RS19000 0.56 -0.5 4,229,286 + QEN71_RS19005 0.18 -0.2 4,229,286 + QEN71_RS19005 0.18 +0.0 4,229,286 + QEN71_RS19005 0.18 +0.2 4,229,286 + QEN71_RS19005 0.18 -0.1 4,229,287 - QEN71_RS19005 0.19 -0.7 4,229,287 - QEN71_RS19005 0.19 +0.2 4,229,302 + QEN71_RS19005 0.23 -1.1 4,229,302 + QEN71_RS19005 0.23 +0.2 4,229,302 + QEN71_RS19005 0.23 +0.3 4,229,302 + QEN71_RS19005 0.23 +0.1 4,229,302 + QEN71_RS19005 0.23 -0.1 4,229,302 + QEN71_RS19005 0.23 -0.8 4,229,302 + QEN71_RS19005 0.23 +0.3 4,229,303 - QEN71_RS19005 0.23 -0.4 4,229,455 + QEN71_RS19005 0.66 -0.4 4,229,455 + QEN71_RS19005 0.66 -0.1 4,229,456 - QEN71_RS19005 0.66 -1.7 4,229,462 + QEN71_RS19005 0.68 -0.1 4,229,462 + QEN71_RS19005 0.68 -0.5 4,229,462 + QEN71_RS19005 0.68 -0.4 4,229,462 + QEN71_RS19005 0.68 -1.0 4,229,462 + QEN71_RS19005 0.68 -0.4 4,229,462 + QEN71_RS19005 0.68 -0.7 4,229,463 - QEN71_RS19005 0.68 -0.2 4,229,463 - QEN71_RS19005 0.68 -1.2 4,229,463 - QEN71_RS19005 0.68 +0.2 4,229,463 - QEN71_RS19005 0.68 +0.9 4,229,463 - QEN71_RS19005 0.68 +1.7 4,229,472 + QEN71_RS19005 0.71 -0.2 4,229,472 + QEN71_RS19005 0.71 -0.7 4,229,473 - QEN71_RS19005 0.71 +0.2 4,229,492 + QEN71_RS19005 0.76 -0.2 4,229,564 + -0.6 4,229,565 - +0.0 4,229,565 - +0.2 4,229,610 + -1.1 4,229,728 - -1.3 4,229,811 + +0.5 4,229,812 - +0.0 4,229,812 - +0.4 4,229,812 - +1.2 4,229,812 - +0.2 4,229,812 - -0.1 4,230,808 + QEN71_RS19010 0.72 -0.1 4,230,836 - QEN71_RS19010 0.74 +1.0 4,231,023 + QEN71_RS19010 0.87 -0.1 4,231,023 + QEN71_RS19010 0.87 +0.4 4,231,024 - QEN71_RS19010 0.87 -0.5 4,231,024 - QEN71_RS19010 0.87 -0.9 4,231,024 - QEN71_RS19010 0.87 -0.2 4,231,203 + -0.3 4,231,233 - -0.4 4,231,408 + QEN71_RS19015 0.84 +0.5 4,231,431 + -0.0 4,231,493 + -0.3 4,231,493 + -0.0 4,231,494 - -1.5 4,231,494 - +0.4 4,231,688 + +0.0 4,231,943 - +0.2 4,231,943 - -1.0 4,232,130 - -1.1
Or see this region's nucleotide sequence