Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03502

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1
3,912,409	-		MIT1002_03501	0.45	-3.3
3,912,589	-		MIT1002_03501	0.60	+0.3
3,912,604	+		MIT1002_03501	0.61	-1.1
3,912,604	+		MIT1002_03501	0.61	+0.1
3,912,604	+		MIT1002_03501	0.61	-1.4
3,912,604	+		MIT1002_03501	0.61	-0.3
3,912,604	+		MIT1002_03501	0.61	-1.0
3,912,604	+		MIT1002_03501	0.61	+0.8
3,912,604	+		MIT1002_03501	0.61	+0.5
3,912,604	+		MIT1002_03501	0.61	-0.1
3,912,604	+		MIT1002_03501	0.61	-0.6
3,912,612	-		MIT1002_03501	0.62	+0.0
3,912,612	-		MIT1002_03501	0.62	-0.5
3,912,612	-		MIT1002_03501	0.62	-2.0
3,912,612	-		MIT1002_03501	0.62	+0.3
3,912,612	-		MIT1002_03501	0.62	+0.4
3,912,612	-		MIT1002_03501	0.62	+1.4
3,912,612	-		MIT1002_03501	0.62	+0.4
3,912,612	-		MIT1002_03501	0.62	+0.4
3,912,612	-		MIT1002_03501	0.62	-0.5
3,912,612	-		MIT1002_03501	0.62	-0.6
3,912,871	+		MIT1002_03501	0.84	+0.6
3,913,021	-				-0.1
3,913,083	+				+0.1
3,913,083	+				+2.7
3,913,091	-				+0.3
3,913,091	-				-0.5
3,913,259	-				-0.7
3,913,266	+				+0.1
3,913,266	+				+0.7
3,913,266	+				-0.7
3,913,266	+				-1.2
3,913,266	+				-0.3
3,913,266	+				-1.0
3,913,266	+				+0.8
3,913,266	+				+1.5
3,913,266	+				+0.8
3,913,266	+				+0.1
3,913,266	+				-0.2
3,913,274	-				+0.2
3,913,274	-				-0.3
3,913,314	+				-0.4
3,913,379	+				+1.1
3,913,400	+		MIT1002_03502	0.13	-0.3
3,913,462	-		MIT1002_03502	0.25	-0.0
3,913,499	-		MIT1002_03502	0.32	+0.3
3,913,523	-		MIT1002_03502	0.37	-0.3
3,913,642	+		MIT1002_03502	0.60	+1.5
3,913,682	-		MIT1002_03502	0.68	-0.0
3,913,713	-		MIT1002_03502	0.74	-0.6
3,913,720	+		MIT1002_03502	0.76	-3.0
3,913,837	+				+0.1
3,913,879	+				-0.3
3,913,925	-				-3.1
3,913,958	-				+0.5
3,913,978	+				-1.7
3,914,023	-				+1.3
3,914,023	-				-0.4
3,914,023	-				-2.1
3,914,067	-		MIT1002_03503	0.21	-0.8
3,914,356	+				-2.8
3,914,364	-				-1.2
3,914,370	+				-2.6
3,914,370	+				+1.3
3,914,378	-				-1.4
3,914,378	-				+1.5
3,914,434	+				+0.8
3,914,436	+				+0.5
3,914,436	+				-0.5
3,914,456	+				-1.3
3,914,464	-				+2.2
3,914,579	+				-1.1
3,914,586	+				+0.1
3,914,594	-				-0.2
3,914,598	+				-1.0
3,914,598	+				+0.3
3,914,598	+				-0.6
3,914,613	+				+2.5
3,914,672	-				+0.3
3,914,769	-		MIT1002_03504	0.15	-0.7
3,914,785	+		MIT1002_03504	0.17	+0.1
3,914,785	+		MIT1002_03504	0.17	-2.1
3,914,790	+		MIT1002_03504	0.17	-0.8
3,914,840	-		MIT1002_03504	0.23	-0.2
3,914,840	-		MIT1002_03504	0.23	-0.6