Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03374

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1
3,774,915	-		MIT1002_03373	0.47	+0.4
3,774,942	+		MIT1002_03373	0.49	-0.6
3,774,950	-		MIT1002_03373	0.49	+0.2
3,775,015	-		MIT1002_03373	0.54	-1.5
3,775,045	+		MIT1002_03373	0.56	-0.8
3,775,087	+		MIT1002_03373	0.59	-1.8
3,775,087	+		MIT1002_03373	0.59	-0.8
3,775,095	-		MIT1002_03373	0.59	+0.9
3,775,154	-		MIT1002_03373	0.64	+0.3
3,775,265	+		MIT1002_03373	0.71	-0.4
3,775,318	+		MIT1002_03373	0.75	-1.6
3,775,326	-		MIT1002_03373	0.76	+0.4
3,775,415	+		MIT1002_03373	0.82	-0.3
3,775,427	+		MIT1002_03373	0.83	-1.4
3,775,566	-				-0.3
3,775,609	-				+1.4
3,775,609	-				+0.0
3,775,609	-				+0.6
3,775,919	-		MIT1002_03374	0.62	-0.6
3,775,988	+		MIT1002_03374	0.85	-0.4
3,775,989	+		MIT1002_03374	0.85	-1.0
3,775,998	-		MIT1002_03374	0.88	-0.7
3,776,022	-				-0.6
3,776,022	-				-3.3
3,776,047	+				-0.3
3,776,047	+				-1.0
3,776,055	+				-1.3
3,776,055	+				+0.4
3,776,055	+				-1.8
3,776,069	+				+0.3
3,776,077	-				-1.0
3,776,077	-				+0.0
3,776,077	-				+1.0
3,776,087	+				+0.1
3,776,198	+				-1.0
3,776,227	+		MIT1002_03375	0.12	+1.1
3,776,227	+		MIT1002_03375	0.12	-0.2
3,776,235	-		MIT1002_03375	0.13	-0.4
3,776,245	-		MIT1002_03375	0.15	+2.3
3,776,252	+		MIT1002_03375	0.16	+1.4
3,776,252	-		MIT1002_03375	0.16	+0.8
3,776,295	+		MIT1002_03375	0.24	-0.5
3,776,364	+		MIT1002_03375	0.36	-0.9
3,776,381	+		MIT1002_03375	0.39	+0.3
3,776,416	+		MIT1002_03375	0.45	-1.1
3,776,550	+		MIT1002_03375	0.69	+0.4
3,776,558	-		MIT1002_03375	0.70	-0.1
3,776,573	-		MIT1002_03375	0.73	-0.1
3,776,584	+		MIT1002_03375	0.75	+0.3
3,776,584	+		MIT1002_03375	0.75	+0.8
3,776,704	+				+0.6
3,776,764	+				+2.5
3,776,795	-				-0.3
3,776,795	-				-2.3
3,776,795	-				+1.1
3,776,811	-				-0.1
3,776,856	-				-0.5
3,776,895	+				-0.9
3,776,923	+				-0.9
3,776,976	-		MIT1002_03376	0.11	+0.5
3,776,978	+		MIT1002_03376	0.11	+0.0
3,776,981	+		MIT1002_03376	0.12	-0.3
3,776,981	+		MIT1002_03376	0.12	+0.6
3,776,986	-		MIT1002_03376	0.12	+0.0
3,776,986	-		MIT1002_03376	0.12	-0.1
3,777,015	-		MIT1002_03376	0.13	+0.8