Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03243

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1
3,611,465	+		MIT1002_03242	0.29	-0.3
3,611,499	-		MIT1002_03242	0.32	+0.3
3,611,543	-		MIT1002_03242	0.35	+0.0
3,611,603	+		MIT1002_03242	0.39	+0.1
3,611,667	+		MIT1002_03242	0.44	-0.3
3,611,739	-		MIT1002_03242	0.49	+0.2
3,611,773	-		MIT1002_03242	0.52	+0.4
3,611,888	-		MIT1002_03242	0.60	+0.6
3,611,897	+		MIT1002_03242	0.61	+0.6
3,611,905	-		MIT1002_03242	0.62	-0.5
3,611,944	+		MIT1002_03242	0.64	-0.9
3,611,944	+		MIT1002_03242	0.64	+0.2
3,611,944	+		MIT1002_03242	0.64	-0.6
3,611,944	+		MIT1002_03242	0.64	+0.2
3,611,949	-		MIT1002_03242	0.65	+1.7
3,611,952	-		MIT1002_03242	0.65	-0.3
3,611,952	-		MIT1002_03242	0.65	+0.0
3,611,952	-		MIT1002_03242	0.65	+1.6
3,611,952	-		MIT1002_03242	0.65	-3.7
3,611,956	+		MIT1002_03242	0.65	+0.6
3,612,047	+		MIT1002_03242	0.72	-0.2
3,612,047	+		MIT1002_03242	0.72	+0.5
3,612,047	+		MIT1002_03242	0.72	+0.4
3,612,048	+		MIT1002_03242	0.72	+0.8
3,612,048	+		MIT1002_03242	0.72	-0.0
3,612,048	+		MIT1002_03242	0.72	-0.6
3,612,048	+		MIT1002_03242	0.72	-0.5
3,612,048	+		MIT1002_03242	0.72	-0.4
3,612,048	+		MIT1002_03242	0.72	-1.1
3,612,048	+		MIT1002_03242	0.72	+0.7
3,612,048	+		MIT1002_03242	0.72	+1.6
3,612,056	-		MIT1002_03242	0.73	-0.1
3,612,056	-		MIT1002_03242	0.73	+0.6
3,612,056	-		MIT1002_03242	0.73	+0.8
3,612,056	-		MIT1002_03242	0.73	-0.9
3,612,056	-		MIT1002_03242	0.73	+2.4
3,612,058	+		MIT1002_03242	0.73	+0.2
3,612,147	-		MIT1002_03242	0.79	-0.9
3,612,147	-		MIT1002_03242	0.79	+0.1
3,612,151	+		MIT1002_03242	0.80	+0.2
3,612,151	+		MIT1002_03242	0.80	+0.1
3,612,151	+		MIT1002_03242	0.80	-0.1
3,612,156	+		MIT1002_03242	0.80	+0.3
3,612,156	+		MIT1002_03242	0.80	+0.1
3,612,156	+		MIT1002_03242	0.80	-0.2
3,612,156	+		MIT1002_03242	0.80	-0.7
3,612,159	-		MIT1002_03242	0.80	-0.2
3,612,159	-		MIT1002_03242	0.80	+0.7
3,612,159	-		MIT1002_03242	0.80	+0.1
3,612,159	-		MIT1002_03242	0.80	-0.3
3,612,159	-		MIT1002_03242	0.80	+0.2
3,612,159	-		MIT1002_03242	0.80	+1.3
3,612,159	-		MIT1002_03242	0.80	+0.3
3,612,164	-		MIT1002_03242	0.81	-0.7
3,612,164	-		MIT1002_03242	0.81	+0.3
3,612,164	-		MIT1002_03242	0.81	+1.5
3,612,164	-		MIT1002_03242	0.81	-1.3
3,612,164	-		MIT1002_03242	0.81	+0.0
3,612,214	-		MIT1002_03242	0.84	-0.8
3,612,226	+		MIT1002_03242	0.85	-1.2
3,612,234	-		MIT1002_03242	0.86	-0.5
3,612,263	+		MIT1002_03242	0.88	-0.9
3,612,263	+		MIT1002_03242	0.88	+0.5
3,612,285	+		MIT1002_03242	0.90	+0.1
3,612,285	+		MIT1002_03242	0.90	-1.6
3,612,293	-				-1.1
3,612,293	-				+1.5
3,612,293	-				-0.4
3,612,324	+				-1.1
3,612,325	+				-0.3
3,612,325	+				-0.6
3,612,325	+				+0.6
3,612,325	+				-3.1
3,612,325	+				-2.1
3,612,333	+				-0.5
3,612,333	-				+0.0
3,612,333	-				+0.5
3,612,333	-				-0.9
3,612,333	-				-0.7
3,612,333	-				-1.8
3,612,335	+				-0.1
3,612,341	-				-0.6
3,612,343	+				-1.9
3,612,343	+				-0.2
3,612,343	-				+0.0
3,612,343	-				-0.0
3,612,352	-				-0.1
3,612,352	-				-0.1
3,612,352	-				-0.8
3,612,352	-				-0.5
3,612,352	-				-0.2
3,612,381	-				+1.3
3,612,383	+				-0.3
3,612,383	+				-0.3
3,612,383	+				-0.1
3,612,391	-				-0.0
3,612,411	-				-0.3
3,612,457	-				-0.1
3,612,471	-				-2.6
3,612,481	-				+1.6
3,612,506	-		MIT1002_03243	0.14	-0.8
3,612,521	-		MIT1002_03243	0.18	+0.1
3,612,545	+		MIT1002_03243	0.24	+0.2
3,612,552	-		MIT1002_03243	0.25	+0.0
3,612,553	-		MIT1002_03243	0.26	+0.2
3,612,555	+		MIT1002_03243	0.26	-1.5
3,612,568	-		MIT1002_03243	0.29	+0.4
3,612,609	-		MIT1002_03243	0.40	-1.8
3,612,650	-		MIT1002_03243	0.50	-0.3
3,612,674	+		MIT1002_03243	0.56	+0.6
3,612,674	+		MIT1002_03243	0.56	+0.6
3,612,674	+		MIT1002_03243	0.56	-0.7
3,612,674	+		MIT1002_03243	0.56	-1.0
3,612,682	+		MIT1002_03243	0.58	-0.3
3,612,682	-		MIT1002_03243	0.58	-0.9
3,612,690	-		MIT1002_03243	0.60	+0.7
3,612,696	-		MIT1002_03243	0.61	+0.1
3,612,709	+		MIT1002_03243	0.64	-0.6
3,612,732	-		MIT1002_03243	0.70	-1.0
3,612,735	+		MIT1002_03243	0.71	-3.5
3,612,743	-		MIT1002_03243	0.73	-0.1
3,612,755	+		MIT1002_03243	0.76	+0.1
3,612,802	-		MIT1002_03243	0.88	+1.3
3,612,807	+		MIT1002_03243	0.89	-0.6
3,612,807	+		MIT1002_03243	0.89	-0.4
3,612,813	-				+0.2
3,612,815	-				+1.1
3,612,851	+				-0.0
3,612,859	-				-1.8
3,612,886	+				+0.9
3,612,888	+				+1.8
3,612,894	-				-0.5
3,612,894	-				-1.4
3,612,896	-				-0.4
3,612,896	-				-0.5
3,612,900	-				+0.2
3,612,902	-				+0.2
3,612,976	-				-1.6
3,612,979	+				-1.3
3,612,979	+				-0.5
3,612,984	+				-0.2
3,612,984	+				-1.9
3,612,987	-				-0.1
3,612,987	-				+2.3
3,612,987	-				-0.8
3,612,987	-				+0.3
3,612,987	-				+0.0
3,612,992	-				-0.6
3,613,009	-				-0.3
3,613,045	-				-3.4
3,613,045	-				+1.0
3,613,045	-				+0.1
3,613,046	-				-0.9
3,613,053	-				+0.2
3,613,080	+				-0.2
3,613,119	+				+0.8
3,613,230	-				-0.7
3,613,232	-				+2.3
3,613,356	+				-0.2
3,613,356	+				-2.3
3,613,356	+				-0.6
3,613,356	+				+0.1
3,613,356	+				-0.3
3,613,356	+				-1.3
3,613,356	+				+0.1
3,613,356	+				-1.1
3,613,356	+				-0.7
3,613,356	+				+0.9
3,613,356	+				-0.8
3,613,356	+				+1.6
3,613,364	-				+1.7
3,613,364	-				-0.2
3,613,364	-				+0.2
3,613,364	-				-0.4
3,613,364	-				+0.2
3,613,364	-				-0.3
3,613,364	-				-0.4
3,613,364	-				+0.6
3,613,364	-				+0.6
3,613,364	-				+0.4
3,613,366	+				+0.2
3,613,374	-				-0.5
3,613,374	-				+1.2
3,613,374	-				+0.3
3,613,381	+		MIT1002_03244	0.10	-1.0
3,613,381	+		MIT1002_03244	0.10	-0.1
3,613,387	-		MIT1002_03244	0.11	-0.2
3,613,398	+		MIT1002_03244	0.12	+0.2
3,613,398	-		MIT1002_03244	0.12	+0.3
3,613,406	-		MIT1002_03244	0.13	-1.1
3,613,466	-		MIT1002_03244	0.18	+0.8
3,613,470	+		MIT1002_03244	0.18	+0.8
3,613,470	-		MIT1002_03244	0.18	-0.1
3,613,492	-		MIT1002_03244	0.20	-0.7
3,613,492	-		MIT1002_03244	0.20	+3.2
3,613,492	-		MIT1002_03244	0.20	-0.7
3,613,492	-		MIT1002_03244	0.20	-0.0
3,613,493	+		MIT1002_03244	0.20	+2.0
3,613,493	+		MIT1002_03244	0.20	-0.2
3,613,493	+		MIT1002_03244	0.20	-0.1
3,613,493	+		MIT1002_03244	0.20	+0.6
3,613,493	+		MIT1002_03244	0.20	-1.6
3,613,494	+		MIT1002_03244	0.20	+0.7
3,613,502	-		MIT1002_03244	0.21	+0.4
3,613,557	-		MIT1002_03244	0.25	+1.9
3,613,560	+		MIT1002_03244	0.26	+0.1
3,613,616	+		MIT1002_03244	0.30	+0.3
3,613,629	-		MIT1002_03244	0.31	-0.0
3,613,630	-		MIT1002_03244	0.31	-0.6
3,613,655	+		MIT1002_03244	0.34	-0.5
3,613,661	-		MIT1002_03244	0.34	-0.7
3,613,668	+		MIT1002_03244	0.35	-0.3
3,613,676	-		MIT1002_03244	0.35	+0.1
3,613,702	-		MIT1002_03244	0.37	-1.3
3,613,826	-		MIT1002_03244	0.48	-1.5