Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02585

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1
2,884,997	+		MIT1002_02583	0.75	-0.0
2,885,005	-		MIT1002_02583	0.77	-0.2
2,885,053	-		MIT1002_02583	0.86	+0.5
2,885,290	+		MIT1002_02584	0.26	-0.7
2,885,398	+		MIT1002_02584	0.42	+1.9
2,885,464	-		MIT1002_02584	0.52	+0.3
2,885,481	-		MIT1002_02584	0.54	-0.3
2,885,499	-		MIT1002_02584	0.57	+1.8
2,885,557	+		MIT1002_02584	0.66	+0.2
2,885,557	+		MIT1002_02584	0.66	-1.1
2,885,575	+		MIT1002_02584	0.68	-0.1
2,885,582	+		MIT1002_02584	0.70	-0.8
2,885,590	-		MIT1002_02584	0.71	-0.2
2,885,637	+		MIT1002_02584	0.78	+0.2
2,885,637	+		MIT1002_02584	0.78	+0.1
2,885,645	-		MIT1002_02584	0.79	-2.9
2,885,682	-		MIT1002_02584	0.84	+0.6
2,885,756	+				+0.5
2,885,789	-				+0.3
2,886,038	+		MIT1002_02585	0.23	-1.6
2,886,051	-		MIT1002_02585	0.25	+0.1
2,886,056	-		MIT1002_02585	0.25	+0.2
2,886,123	+		MIT1002_02585	0.31	+0.8
2,886,169	-		MIT1002_02585	0.35	-2.6
2,886,174	-		MIT1002_02585	0.36	-2.2
2,886,184	-		MIT1002_02585	0.37	-0.5
2,886,190	+		MIT1002_02585	0.37	-2.2
2,886,205	-		MIT1002_02585	0.39	+0.4
2,886,227	+		MIT1002_02585	0.41	-0.8
2,886,309	+		MIT1002_02585	0.48	-1.4
2,886,357	+		MIT1002_02585	0.53	+0.4
2,886,365	-		MIT1002_02585	0.54	+0.2
2,886,481	-		MIT1002_02585	0.64	+3.0
2,886,577	-		MIT1002_02585	0.73	-1.4
2,886,607	+		MIT1002_02585	0.76	-0.4
2,886,628	+		MIT1002_02585	0.78	+0.6
2,886,711	-		MIT1002_02585	0.86	+0.3
2,886,751	+		MIT1002_02585	0.89	+0.7
2,886,758	-		MIT1002_02585	0.90	-1.3
2,886,759	-				-0.6
2,886,847	+				-0.1
2,886,911	-		MIT1002_02586	0.12	+1.1
2,887,029	+		MIT1002_02586	0.52	+0.3
2,887,056	-		MIT1002_02586	0.61	-1.0
2,887,244	+				+0.2
2,887,252	-				-0.9
2,887,256	+				+0.5
2,887,256	+				-0.6
2,887,259	-				+1.2
2,887,272	-				-0.6
2,887,291	+				+0.8
2,887,299	-				+0.4
2,887,321	+				-1.8
2,887,322	-				-0.3
2,887,398	-				-0.5
2,887,398	-				+0.2
2,887,455	-		MIT1002_02587	0.14	-0.0
2,887,562	+		MIT1002_02587	0.23	-1.0
2,887,603	-		MIT1002_02587	0.27	-0.8
2,887,769	+		MIT1002_02587	0.41	+0.7