Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02487

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1
2,772,482	-				-0.8
2,772,542	+				+0.0
2,772,550	-				+0.1
2,772,550	-				+0.2
2,772,739	+		MIT1002_02485	0.51	-2.1
2,772,766	+		MIT1002_02485	0.86	+0.7
2,772,776	+				-0.1
2,772,784	-				-0.4
2,772,960	-		MIT1002_02486	0.16	+0.9
2,772,968	-		MIT1002_02486	0.17	+1.2
2,773,087	+		MIT1002_02486	0.43	+1.1
2,773,094	-		MIT1002_02486	0.45	-0.9
2,773,111	+		MIT1002_02486	0.48	-0.2
2,773,197	-		MIT1002_02486	0.67	-0.2
2,773,202	-		MIT1002_02486	0.68	+0.4
2,773,204	+		MIT1002_02486	0.68	+1.4
2,773,212	-		MIT1002_02486	0.70	-1.7
2,773,212	-		MIT1002_02486	0.70	+0.3
2,773,284	+		MIT1002_02486	0.86	+0.2
2,773,292	-		MIT1002_02486	0.87	+0.4
2,773,453	+				-0.7
2,773,607	-		MIT1002_02487	0.14	+0.2
2,773,620	+		MIT1002_02487	0.16	-0.5
2,773,628	-		MIT1002_02487	0.17	+1.0
2,773,641	+		MIT1002_02487	0.18	-0.3
2,773,696	+		MIT1002_02487	0.24	-0.2
2,773,696	+		MIT1002_02487	0.24	+0.6
2,773,704	-		MIT1002_02487	0.25	+0.1
2,773,751	-		MIT1002_02487	0.30	+0.8
2,773,754	-		MIT1002_02487	0.31	-0.7
2,773,780	-		MIT1002_02487	0.34	+0.7
2,773,784	+		MIT1002_02487	0.34	+0.1
2,773,817	+		MIT1002_02487	0.38	+1.1
2,773,825	-		MIT1002_02487	0.39	-2.3
2,773,825	-		MIT1002_02487	0.39	-3.5
2,773,825	-		MIT1002_02487	0.39	+0.1
2,773,844	-		MIT1002_02487	0.41	-0.1
2,773,889	+		MIT1002_02487	0.46	-0.1
2,773,894	+		MIT1002_02487	0.46	+1.6
2,774,033	+		MIT1002_02487	0.62	-1.1
2,774,048	-		MIT1002_02487	0.64	-0.2
2,774,083	+		MIT1002_02487	0.67	-2.8
2,774,086	-		MIT1002_02487	0.68	-0.6
2,774,164	+		MIT1002_02487	0.76	+0.9
2,774,164	+		MIT1002_02487	0.76	-1.1
2,774,164	+		MIT1002_02487	0.76	-0.9
2,774,164	+		MIT1002_02487	0.76	+0.6
2,774,173	+		MIT1002_02487	0.77	+1.0
2,774,179	-		MIT1002_02487	0.78	-0.3
2,774,181	+		MIT1002_02487	0.78	+0.8
2,774,183	-		MIT1002_02487	0.79	-0.0
2,774,367	-				+0.0
2,774,367	-				+0.1
2,774,367	-				+0.8
2,774,367	-				+1.3
2,774,367	-				-0.1
2,774,367	-				+0.3
2,774,372	-				+0.3
2,774,389	+				+0.3
2,774,412	+				-0.3
2,774,566	+		MIT1002_02488	0.14	-0.4
2,774,608	-		MIT1002_02488	0.17	+0.0
2,774,608	-		MIT1002_02488	0.17	+0.1
2,774,721	+		MIT1002_02488	0.25	-2.0
2,774,728	-		MIT1002_02488	0.26	+0.2
2,774,761	-		MIT1002_02488	0.28	+0.6
2,774,844	+		MIT1002_02488	0.34	+1.7
2,774,848	+		MIT1002_02488	0.34	-2.1
2,774,936	-		MIT1002_02488	0.40	+0.3
2,774,937	+		MIT1002_02488	0.40	-1.4
2,774,937	+		MIT1002_02488	0.40	-1.3
2,774,945	-		MIT1002_02488	0.41	+0.2
2,774,947	+		MIT1002_02488	0.41	-0.7
2,775,027	+		MIT1002_02488	0.46	+0.2
2,775,044	-		MIT1002_02488	0.48	-0.3
2,775,059	+		MIT1002_02488	0.49	-1.1
2,775,059	+		MIT1002_02488	0.49	+0.0
2,775,067	-		MIT1002_02488	0.49	-0.1
2,775,078	+		MIT1002_02488	0.50	-1.2
2,775,084	-		MIT1002_02488	0.50	-0.3
2,775,086	-		MIT1002_02488	0.50	+0.0
2,775,092	-		MIT1002_02488	0.51	-0.6
2,775,224	+		MIT1002_02488	0.60	+0.7
2,775,281	+		MIT1002_02488	0.64	+1.1
2,775,290	-		MIT1002_02488	0.65	-1.0
2,775,347	+		MIT1002_02488	0.69	+0.3
2,775,362	-		MIT1002_02488	0.70	-0.2