Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02419

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1
2,699,616	+				+0.6
2,699,749	+		MIT1002_02418	0.17	-0.2
2,699,802	+		MIT1002_02418	0.22	+0.4
2,699,908	+		MIT1002_02418	0.33	+0.5
2,699,911	-		MIT1002_02418	0.34	+0.3
2,699,918	+		MIT1002_02418	0.34	-0.1
2,699,926	-		MIT1002_02418	0.35	+0.6
2,699,936	-		MIT1002_02418	0.36	-0.9
2,699,948	+		MIT1002_02418	0.37	+0.4
2,699,948	+		MIT1002_02418	0.37	+0.9
2,699,948	+		MIT1002_02418	0.37	+0.3
2,699,948	+		MIT1002_02418	0.37	+1.0
2,699,948	+		MIT1002_02418	0.37	+0.5
2,699,956	-		MIT1002_02418	0.38	+1.1
2,699,956	-		MIT1002_02418	0.38	+0.1
2,699,956	-		MIT1002_02418	0.38	+1.1
2,699,957	-		MIT1002_02418	0.38	-0.3
2,700,151	+		MIT1002_02418	0.58	+0.7
2,700,159	-		MIT1002_02418	0.59	+1.3
2,700,201	+		MIT1002_02418	0.63	-2.0
2,700,201	+		MIT1002_02418	0.63	-2.0
2,700,201	+		MIT1002_02418	0.63	-2.0
2,700,208	+		MIT1002_02418	0.64	+1.1
2,700,216	-		MIT1002_02418	0.65	+0.7
2,700,322	+		MIT1002_02418	0.75	-0.3
2,700,535	+				+1.1
2,700,536	+				+0.1
2,700,536	+				+0.1
2,700,762	+		MIT1002_02419	0.26	+0.6
2,700,798	+		MIT1002_02419	0.32	+0.9
2,700,896	-		MIT1002_02419	0.46	-0.4
2,700,908	-		MIT1002_02419	0.48	+0.9
2,700,908	-		MIT1002_02419	0.48	+0.4
2,700,942	-		MIT1002_02419	0.53	-0.3
2,701,037	+		MIT1002_02419	0.68	-0.5
2,701,135	-		MIT1002_02419	0.82	+0.8
2,701,176	+		MIT1002_02419	0.88	-0.1
2,701,184	-		MIT1002_02419	0.90	-1.2
2,701,184	-		MIT1002_02419	0.90	+0.5
2,701,184	-		MIT1002_02419	0.90	+0.5
2,701,208	-				+0.6
2,701,299	+				+0.3
2,701,318	-				+1.7
2,701,340	+				+1.4
2,701,340	+				-0.7
2,701,348	-		MIT1002_02420	0.11	+1.1
2,701,433	+		MIT1002_02420	0.25	+0.5
2,701,441	-		MIT1002_02420	0.27	+1.0
2,701,481	+		MIT1002_02420	0.34	+0.9
2,701,486	+		MIT1002_02420	0.34	+0.1
2,701,489	-		MIT1002_02420	0.35	-0.9
2,701,494	-		MIT1002_02420	0.36	+1.0
2,701,503	-		MIT1002_02420	0.37	+1.5
2,701,523	+		MIT1002_02420	0.41	-0.1
2,701,523	+		MIT1002_02420	0.41	-1.7
2,701,525	+		MIT1002_02420	0.41	-0.5
2,701,559	+		MIT1002_02420	0.47	+0.7
2,701,561	+		MIT1002_02420	0.47	+1.3
2,701,561	+		MIT1002_02420	0.47	+0.1
2,701,569	-		MIT1002_02420	0.48	-0.5
2,701,596	+		MIT1002_02420	0.53	-1.5
2,701,675	+		MIT1002_02420	0.66	+1.3
2,701,718	-		MIT1002_02420	0.73	-0.9
2,701,749	+		MIT1002_02420	0.79	+0.3
2,701,790	-		MIT1002_02420	0.86	-0.4
2,701,870	+				-0.4
2,701,986	-				+0.0
2,701,986	-				-1.0
2,702,008	+				+0.2
2,702,008	+				-1.9
2,702,008	+				+0.3
2,702,138	+		MIT1002_02421	0.13	+1.6
2,702,138	+		MIT1002_02421	0.13	+0.2