Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02201

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1
2,459,827	-				-1.1
2,459,884	-				-0.6
2,459,914	-				+0.2
2,459,992	-				-0.2
2,460,003	+				+1.3
2,460,003	+				+0.8
2,460,003	+				+1.2
2,460,063	+				+0.4
2,460,174	-				-0.4
2,460,209	+		MIT1002_02200	0.15	-0.1
2,460,218	-		MIT1002_02200	0.18	-0.5
2,460,223	+		MIT1002_02200	0.20	-0.1
2,460,228	+		MIT1002_02200	0.21	+0.7
2,460,228	+		MIT1002_02200	0.21	+0.3
2,460,228	+		MIT1002_02200	0.21	+0.0
2,460,229	+		MIT1002_02200	0.22	+0.2
2,460,229	+		MIT1002_02200	0.22	-1.1
2,460,229	+		MIT1002_02200	0.22	+0.4
2,460,236	-		MIT1002_02200	0.24	-0.9
2,460,236	-		MIT1002_02200	0.24	+0.4
2,460,237	-		MIT1002_02200	0.24	+0.2
2,460,237	-		MIT1002_02200	0.24	+2.4
2,460,237	-		MIT1002_02200	0.24	+0.2
2,460,377	+		MIT1002_02200	0.69	-0.7
2,460,429	+		MIT1002_02200	0.86	-0.2
2,460,475	-				+1.1
2,460,496	+				-0.6
2,460,521	+				-0.4
2,460,545	-				-1.1
2,460,584	-				+0.0
2,460,646	+				-0.3
2,460,646	+				+0.2
2,460,646	+				+2.0
2,460,654	-				+0.9
2,460,654	-				-2.1
2,460,654	-				-0.3
2,460,654	-				-0.5
2,460,654	-				-0.1
2,460,654	-				-1.3
2,460,654	-				-1.9
2,460,654	-				+0.2
2,460,686	-				-0.3
2,460,686	-				+0.5
2,460,709	-				+0.4
2,460,818	-				-0.9
2,460,820	+				+1.2
2,460,820	+				-0.7
2,460,820	+				-0.8
2,460,820	+				+0.2
2,460,820	+				+0.1
2,460,820	+				+0.6
2,460,820	+				+0.6
2,460,820	+				-0.3
2,460,820	+				-2.2
2,460,820	+				-0.3
2,460,828	-				-1.9
2,460,828	-				+0.3
2,460,828	-				-0.6
2,460,828	-				+0.2
2,460,828	-				-1.0
2,460,828	-				-0.7
2,460,828	-				-0.1
2,460,828	-				-1.0
2,460,828	-				+0.5
2,460,828	-				-0.4
2,460,828	-				-0.4
2,460,828	-				+0.4
2,460,828	-				+0.6
2,460,851	-				+1.1
2,460,874	-				-0.2
2,460,875	+				+1.0
2,460,883	-				+0.3
2,460,944	+		MIT1002_02201	0.13	+0.2
2,460,952	-		MIT1002_02201	0.14	+0.8
2,460,952	-		MIT1002_02201	0.14	+0.7
2,460,959	+		MIT1002_02201	0.14	+1.8
2,460,959	+		MIT1002_02201	0.14	+1.2
2,460,967	-		MIT1002_02201	0.15	-0.3
2,460,976	+		MIT1002_02201	0.16	+0.9
2,460,981	+		MIT1002_02201	0.16	+0.4
2,460,983	+		MIT1002_02201	0.16	-0.3
2,461,106	+		MIT1002_02201	0.28	+0.1
2,461,155	-		MIT1002_02201	0.32	+0.1
2,461,174	+		MIT1002_02201	0.34	+0.3
2,461,174	+		MIT1002_02201	0.34	+1.1
2,461,174	+		MIT1002_02201	0.34	+0.8
2,461,176	+		MIT1002_02201	0.34	-0.0
2,461,181	+		MIT1002_02201	0.34	+0.3
2,461,181	+		MIT1002_02201	0.34	+0.7
2,461,213	+		MIT1002_02201	0.37	+0.5
2,461,239	-		MIT1002_02201	0.40	-0.1
2,461,239	-		MIT1002_02201	0.40	+0.1
2,461,321	-		MIT1002_02201	0.47	+0.1
2,461,349	+		MIT1002_02201	0.50	+0.4
2,461,350	+		MIT1002_02201	0.50	-1.1
2,461,442	-		MIT1002_02201	0.58	-0.1
2,461,489	+		MIT1002_02201	0.62	+0.1
2,461,489	+		MIT1002_02201	0.62	-1.1
2,461,497	-		MIT1002_02201	0.63	+1.0
2,461,508	+		MIT1002_02201	0.64	-0.4
2,461,626	+		MIT1002_02201	0.75	+0.0
2,461,677	+		MIT1002_02201	0.80	+0.1
2,461,679	-		MIT1002_02201	0.80	-1.6
2,461,685	-		MIT1002_02201	0.80	-2.6
2,461,742	+		MIT1002_02201	0.86	+0.2
2,461,857	+				+0.3
2,461,862	+				-1.4
2,461,894	+				+0.6
2,461,894	+				+0.6
2,461,894	+				-0.2
2,461,902	-				-0.5
2,461,902	-				-0.9
2,461,912	-				+0.2
2,461,992	+				-1.0
2,461,993	+				-0.1
2,461,993	+				-0.4
2,462,001	-				+0.9
2,462,018	-				-0.3
2,462,050	+				+1.1
2,462,059	+				-0.8
2,462,072	+				-0.3
2,462,157	+				+1.1
2,462,211	+		MIT1002_02202	0.12	-0.1
2,462,211	+		MIT1002_02202	0.12	+0.0
2,462,232	+		MIT1002_02202	0.13	-0.7
2,462,330	+		MIT1002_02202	0.17	+1.8
2,462,448	+		MIT1002_02202	0.22	-0.2
2,462,527	-		MIT1002_02202	0.25	+0.0
2,462,568	-		MIT1002_02202	0.27	-0.1
2,462,669	+		MIT1002_02202	0.31	-1.2
2,462,679	+		MIT1002_02202	0.32	+0.1
2,462,679	+		MIT1002_02202	0.32	+0.4
2,462,734	+		MIT1002_02202	0.34	+1.1
2,462,742	-		MIT1002_02202	0.34	-1.2
2,462,742	-		MIT1002_02202	0.34	+1.0
2,462,773	-		MIT1002_02202	0.36	-0.8
2,462,773	-		MIT1002_02202	0.36	+0.1
2,462,773	-		MIT1002_02202	0.36	+0.5
2,462,837	+		MIT1002_02202	0.39	+0.2
2,462,839	-		MIT1002_02202	0.39	-0.0