Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01691

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1
1,878,612	+		MIT1002_01689	0.66	+0.3
1,878,630	-		MIT1002_01689	0.68	+0.7
1,878,690	+		MIT1002_01689	0.74	-0.3
1,878,743	+		MIT1002_01689	0.79	+0.9
1,878,806	+		MIT1002_01689	0.86	+1.0
1,878,821	+		MIT1002_01689	0.87	+3.3
1,878,845	-		MIT1002_01689	0.90	+0.9
1,878,862	+				+0.9
1,878,867	+				+1.7
1,878,867	+				+1.1
1,878,887	+				+0.2
1,878,909	+				-0.5
1,878,927	-				-0.5
1,878,932	-				-0.4
1,879,137	+		MIT1002_01690	0.36	-0.5
1,879,162	+		MIT1002_01690	0.42	-0.4
1,879,182	+		MIT1002_01690	0.46	+0.5
1,879,240	+		MIT1002_01690	0.58	-0.5
1,879,261	-		MIT1002_01690	0.63	+1.4
1,879,307	-		MIT1002_01690	0.72	+1.4
1,879,307	-		MIT1002_01690	0.72	+0.9
1,879,326	+		MIT1002_01690	0.76	+2.6
1,879,328	-		MIT1002_01690	0.77	+1.7
1,879,358	+		MIT1002_01690	0.83	+0.4
1,879,363	+		MIT1002_01690	0.84	-3.4
1,879,372	-		MIT1002_01690	0.86	+0.6
1,879,379	+		MIT1002_01690	0.88	+0.4
1,879,379	+		MIT1002_01690	0.88	-0.6
1,879,379	+		MIT1002_01690	0.88	+0.3
1,879,379	+		MIT1002_01690	0.88	+1.1
1,879,379	+		MIT1002_01690	0.88	+3.2
1,879,387	-		MIT1002_01690	0.89	-1.0
1,879,498	+				-0.3
1,880,253	+				+1.0
1,880,257	-				-2.7
1,880,418	-				-0.9
1,880,468	+				-0.3
1,880,512	+		MIT1002_01692	0.13	+0.6
1,880,609	+		MIT1002_01692	0.19	-0.0
1,880,609	+		MIT1002_01692	0.19	+0.2
1,880,609	+		MIT1002_01692	0.19	+0.3
1,880,609	+		MIT1002_01692	0.19	+0.5
1,880,609	+		MIT1002_01692	0.19	-0.5
1,880,617	-		MIT1002_01692	0.20	-3.3
1,880,617	-		MIT1002_01692	0.20	+1.0
1,880,631	-		MIT1002_01692	0.21	+0.8
1,880,683	+		MIT1002_01692	0.24	+0.4
1,880,716	-		MIT1002_01692	0.26	+0.8
1,880,843	+		MIT1002_01692	0.35	-0.1
1,880,937	-		MIT1002_01692	0.41	+0.7
1,880,963	+		MIT1002_01692	0.43	-2.2
1,880,995	+		MIT1002_01692	0.45	-0.2
1,880,995	+		MIT1002_01692	0.45	-0.0
1,881,093	+		MIT1002_01692	0.52	-1.3
1,881,101	-		MIT1002_01692	0.52	+0.1
1,881,260	-		MIT1002_01692	0.63	-0.6