Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01482

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1
1,642,178	+				-1.3
1,642,219	+				-2.0
1,642,284	+		MIT1002_01482	0.31	+0.4
1,642,552	-		MIT1002_01483	0.13	-0.5
1,642,553	-		MIT1002_01483	0.14	+0.4
1,642,553	-		MIT1002_01483	0.14	+1.7
1,642,580	+		MIT1002_01483	0.19	+0.5
1,642,644	-		MIT1002_01483	0.33	-0.2
1,642,646	+		MIT1002_01483	0.33	-1.3
1,642,677	+		MIT1002_01483	0.39	+0.9
1,642,685	-		MIT1002_01483	0.41	-0.7
1,642,701	+		MIT1002_01483	0.44	-1.5
1,642,701	+		MIT1002_01483	0.44	+0.0
1,642,740	+		MIT1002_01483	0.52	+0.1
1,642,740	+		MIT1002_01483	0.52	+1.1
1,642,750	+		MIT1002_01483	0.54	+0.1
1,642,807	+		MIT1002_01483	0.66	-0.5
1,642,830	-		MIT1002_01483	0.71	-2.3
1,642,830	-		MIT1002_01483	0.71	-0.5
1,642,860	+		MIT1002_01483	0.77	+0.8
1,642,872	+		MIT1002_01483	0.80	+1.3
1,642,879	+		MIT1002_01483	0.81	-0.7
1,642,881	-		MIT1002_01483	0.82	-1.6
1,643,042	-				+1.9
1,643,145	-		MIT1002_01484	0.17	+0.1
1,643,184	-		MIT1002_01484	0.23	-2.4
1,643,351	+		MIT1002_01484	0.51	+0.4
1,643,351	+		MIT1002_01484	0.51	-0.5
1,643,374	+		MIT1002_01484	0.55	+0.2
1,643,382	-		MIT1002_01484	0.57	-0.1