Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01441

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1
1,584,243	+		MIT1002_01440	0.37	+0.8
1,584,330	+		MIT1002_01440	0.44	+0.5
1,584,360	-		MIT1002_01440	0.46	-0.5
1,584,496	-		MIT1002_01440	0.57	-1.1
1,584,554	-		MIT1002_01440	0.61	-0.7
1,584,601	+		MIT1002_01440	0.65	+1.1
1,584,601	+		MIT1002_01440	0.65	+0.2
1,584,601	+		MIT1002_01440	0.65	+0.5
1,584,601	+		MIT1002_01440	0.65	-0.2
1,584,609	-		MIT1002_01440	0.66	-0.3
1,584,723	-		MIT1002_01440	0.75	-0.6
1,584,725	+		MIT1002_01440	0.75	+1.6
1,584,733	-		MIT1002_01440	0.75	+0.3
1,584,733	-		MIT1002_01440	0.75	+0.3
1,584,812	-		MIT1002_01440	0.81	+3.0
1,584,839	-		MIT1002_01440	0.84	-1.1
1,584,851	+		MIT1002_01440	0.84	+0.0
1,584,999	-				+0.2
1,585,018	-				+1.4
1,585,093	-				+1.0
1,585,095	+				+0.3
1,585,115	-				-0.2
1,585,132	+				-1.3
1,585,258	+		MIT1002_01441	0.11	+0.4
1,585,266	-		MIT1002_01441	0.13	+1.1
1,585,273	-		MIT1002_01441	0.14	+1.7
1,585,274	+		MIT1002_01441	0.14	+0.2
1,585,332	-		MIT1002_01441	0.23	+0.1
1,585,410	+		MIT1002_01441	0.35	+0.0
1,585,562	+		MIT1002_01441	0.58	+2.8
1,585,570	-		MIT1002_01441	0.59	+0.6
1,585,576	+		MIT1002_01441	0.60	+2.0
1,585,576	+		MIT1002_01441	0.60	-0.8
1,585,576	+		MIT1002_01441	0.60	+0.5
1,585,611	-		MIT1002_01441	0.65	-1.1
1,585,619	+		MIT1002_01441	0.67	-1.7
1,585,624	+		MIT1002_01441	0.67	+0.2
1,585,632	-		MIT1002_01441	0.69	-0.7
1,585,632	-		MIT1002_01441	0.69	+0.9
1,585,632	-		MIT1002_01441	0.69	+0.9
1,585,632	-		MIT1002_01441	0.69	+1.6
1,585,632	-		MIT1002_01441	0.69	+0.1
1,585,647	-		MIT1002_01441	0.71	-0.4
1,585,676	+		MIT1002_01441	0.75	+0.5
1,585,678	+		MIT1002_01441	0.76	-0.1
1,585,701	-		MIT1002_01441	0.79	+0.9
1,585,765	+		MIT1002_01441	0.89	+0.2
1,585,772	+				+0.7
1,585,772	+				-0.6
1,585,780	-				+1.7
1,585,780	-				-1.8
1,585,789	+				-1.4
1,585,834	-				-0.1
1,585,893	+				-0.3
1,585,967	-				+0.4
1,585,989	+		MIT1002_01442	0.13	+0.8
1,586,374	-				+0.1
1,586,594	+		MIT1002_01443	0.10	-0.6
1,586,763	+		MIT1002_01443	0.20	-3.0
1,586,763	+		MIT1002_01443	0.20	+1.0
1,586,763	+		MIT1002_01443	0.20	+0.4
1,586,780	-		MIT1002_01443	0.21	-0.5