Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01360

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1
1,504,924	+		MIT1002_01359	0.68	-1.0
1,504,930	-		MIT1002_01359	0.68	+0.1
1,505,042	-		MIT1002_01359	0.72	-0.5
1,505,202	-		MIT1002_01359	0.77	-2.2
1,505,313	+		MIT1002_01359	0.80	-0.1
1,505,321	-		MIT1002_01359	0.81	+0.5
1,505,321	-		MIT1002_01359	0.81	+1.5
1,505,321	-		MIT1002_01359	0.81	+1.1
1,505,335	+		MIT1002_01359	0.81	+0.3
1,505,335	+		MIT1002_01359	0.81	-0.2
1,505,335	+		MIT1002_01359	0.81	+0.8
1,505,404	-		MIT1002_01359	0.83	+0.0
1,505,462	-		MIT1002_01359	0.85	-1.0
1,505,523	+		MIT1002_01359	0.87	-0.2
1,505,523	-		MIT1002_01359	0.87	-0.1
1,505,554	-		MIT1002_01359	0.88	+0.9
1,505,601	-		MIT1002_01359	0.90	+1.2
1,505,607	+				-0.5
1,505,687	-				-0.0
1,505,789	+				+0.0
1,505,806	-				+0.1
1,505,812	+				+0.8
1,505,892	-				-0.8
1,505,960	-				-0.6
1,505,984	+				+0.8
1,505,984	+				+0.9
1,506,002	-				+0.9
1,506,005	+				+0.1
1,506,014	-				-1.2
1,506,133	+		MIT1002_01360	0.20	-0.3
1,506,146	+		MIT1002_01360	0.22	+0.3
1,506,154	-		MIT1002_01360	0.22	-0.1
1,506,174	-		MIT1002_01360	0.24	+0.8
1,506,187	-		MIT1002_01360	0.25	-0.3
1,506,242	-		MIT1002_01360	0.30	-0.0
1,506,281	+		MIT1002_01360	0.34	-0.7
1,506,288	+		MIT1002_01360	0.35	-0.1
1,506,298	-		MIT1002_01360	0.36	+0.4
1,506,298	-		MIT1002_01360	0.36	+0.0
1,506,301	-		MIT1002_01360	0.36	+0.3
1,506,319	+		MIT1002_01360	0.38	+1.1
1,506,345	+		MIT1002_01360	0.40	-0.3
1,506,345	+		MIT1002_01360	0.40	+0.7
1,506,515	+		MIT1002_01360	0.56	+1.3
1,506,526	-		MIT1002_01360	0.57	+0.2
1,506,560	-		MIT1002_01360	0.60	-0.4
1,506,596	-		MIT1002_01360	0.63	-0.3
1,506,597	+		MIT1002_01360	0.63	-0.1
1,506,597	+		MIT1002_01360	0.63	+1.3
1,506,597	+		MIT1002_01360	0.63	+1.5
1,506,605	-		MIT1002_01360	0.64	-0.3
1,506,608	-		MIT1002_01360	0.64	+1.0
1,506,667	-		MIT1002_01360	0.70	-1.5
1,506,678	-		MIT1002_01360	0.71	-0.1
1,506,758	+		MIT1002_01360	0.78	+0.2
1,506,775	-		MIT1002_01360	0.79	+0.6
1,506,880	+		MIT1002_01360	0.89	-0.7
1,506,993	+				-0.2
1,507,000	+				-0.5
1,507,177	-				+0.1
1,507,213	-				-1.5
1,507,336	-		MIT1002_01361	0.22	+0.6
1,507,343	+		MIT1002_01361	0.23	-2.3
1,507,381	-		MIT1002_01361	0.29	-0.5
1,507,499	-		MIT1002_01361	0.48	+1.2
1,507,592	+		MIT1002_01361	0.63	+0.4
1,507,600	-		MIT1002_01361	0.65	+1.8
1,507,600	-		MIT1002_01361	0.65	+0.9
1,507,612	-		MIT1002_01361	0.67	+2.4
1,507,617	+		MIT1002_01361	0.67	+1.3
1,507,617	+		MIT1002_01361	0.67	-0.3
1,507,647	-		MIT1002_01361	0.72	-0.1
1,507,707	+		MIT1002_01361	0.82	+0.6
1,507,721	-		MIT1002_01361	0.84	-2.0
1,507,806	-				+0.7
1,507,808	+				-0.4
1,507,808	+				-1.1
1,507,816	-				-0.0
1,507,956	+				-0.7
1,507,957	-				-0.3