Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01149

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1
1,260,846	+		MIT1002_01148	0.18	+1.5
1,260,893	+		MIT1002_01148	0.22	-0.3
1,260,893	+		MIT1002_01148	0.22	-0.1
1,260,893	+		MIT1002_01148	0.22	-0.7
1,260,893	+		MIT1002_01148	0.22	-0.8
1,260,893	+		MIT1002_01148	0.22	-1.5
1,260,893	+		MIT1002_01148	0.22	+2.4
1,260,893	+		MIT1002_01148	0.22	-2.4
1,260,893	+		MIT1002_01148	0.22	-0.1
1,260,893	+		MIT1002_01148	0.22	-0.3
1,260,901	-		MIT1002_01148	0.23	-0.4
1,260,901	-		MIT1002_01148	0.23	-0.5
1,260,901	-		MIT1002_01148	0.23	-0.2
1,260,901	-		MIT1002_01148	0.23	+0.1
1,260,901	-		MIT1002_01148	0.23	+0.5
1,260,901	-		MIT1002_01148	0.23	-0.5
1,260,901	-		MIT1002_01148	0.23	+0.2
1,260,901	-		MIT1002_01148	0.23	+0.3
1,260,901	-		MIT1002_01148	0.23	-0.6
1,260,901	-		MIT1002_01148	0.23	-0.3
1,260,927	+		MIT1002_01148	0.26	+0.0
1,260,983	+		MIT1002_01148	0.31	-1.7
1,260,983	+		MIT1002_01148	0.31	+0.1
1,260,983	+		MIT1002_01148	0.31	+0.9
1,261,010	+		MIT1002_01148	0.34	-1.5
1,261,099	-		MIT1002_01148	0.43	+0.0
1,261,129	+		MIT1002_01148	0.45	-1.7
1,261,132	-		MIT1002_01148	0.46	-1.8
1,261,132	-		MIT1002_01148	0.46	-3.2
1,261,192	+		MIT1002_01148	0.52	+0.2
1,261,287	+		MIT1002_01148	0.61	+3.5
1,261,289	-		MIT1002_01148	0.61	+0.0
1,261,313	+		MIT1002_01148	0.64	+1.9
1,261,321	-		MIT1002_01148	0.64	-1.4
1,261,347	+		MIT1002_01148	0.67	+0.5
1,261,366	-		MIT1002_01148	0.69	-0.2
1,261,366	-		MIT1002_01148	0.69	-0.0
1,261,376	-		MIT1002_01148	0.70	+0.2
1,261,376	-		MIT1002_01148	0.70	-0.0
1,261,376	-		MIT1002_01148	0.70	-0.5
1,261,376	-		MIT1002_01148	0.70	+0.8
1,261,376	-		MIT1002_01148	0.70	+0.2
1,261,376	-		MIT1002_01148	0.70	-1.7
1,261,376	-		MIT1002_01148	0.70	+0.1
1,261,455	+		MIT1002_01148	0.78	-2.2
1,261,465	+		MIT1002_01148	0.79	-0.5
1,261,475	+		MIT1002_01148	0.80	-1.4
1,261,475	+		MIT1002_01148	0.80	-1.0
1,261,477	+		MIT1002_01148	0.80	+1.3
1,261,483	-		MIT1002_01148	0.81	-0.8
1,261,485	-		MIT1002_01148	0.81	+1.6
1,261,490	-		MIT1002_01148	0.81	+0.2
1,261,490	-		MIT1002_01148	0.81	-0.3
1,261,490	-		MIT1002_01148	0.81	-1.7
1,261,536	-		MIT1002_01148	0.86	-0.8
1,261,544	+		MIT1002_01148	0.87	-0.9
1,261,554	+		MIT1002_01148	0.88	-1.7
1,261,562	+		MIT1002_01148	0.88	+0.3
1,261,570	-		MIT1002_01148	0.89	+0.3
1,261,578	-		MIT1002_01148	0.90	+0.3
1,261,656	-				-0.6
1,261,782	-				-0.4
1,261,791	+				-0.4
1,261,792	-				-1.0
1,261,792	-				-0.5
1,261,799	-				-0.3
1,261,882	+				-1.5
1,261,908	+		MIT1002_01149	0.11	-0.5
1,261,925	+		MIT1002_01149	0.14	-0.1
1,261,945	+		MIT1002_01149	0.17	-0.9
1,261,968	-		MIT1002_01149	0.20	-0.1
1,261,981	+		MIT1002_01149	0.22	-0.2
1,261,981	+		MIT1002_01149	0.22	-0.7
1,261,981	+		MIT1002_01149	0.22	+0.1
1,261,981	+		MIT1002_01149	0.22	+1.8
1,261,989	-		MIT1002_01149	0.24	-0.1
1,262,041	-		MIT1002_01149	0.31	-0.7
1,262,077	+		MIT1002_01149	0.37	+0.1
1,262,261	-		MIT1002_01149	0.65	-1.2
1,262,261	-		MIT1002_01149	0.65	+0.4
1,262,261	-		MIT1002_01149	0.65	-0.2
1,262,264	+		MIT1002_01149	0.66	-0.9
1,262,266	-		MIT1002_01149	0.66	+0.3
1,262,333	-		MIT1002_01149	0.76	+1.5
1,262,370	-		MIT1002_01149	0.82	-1.4
1,262,410	-		MIT1002_01149	0.88	-0.1
1,262,418	-		MIT1002_01149	0.89	+0.7
1,262,444	-				+0.0
1,262,455	+				+0.5
1,262,463	-				-0.6
1,262,490	+				-1.0
1,262,508	+				-0.5
1,262,509	-				-0.6
1,262,583	-		MIT1002_01150	0.10	-2.0
1,262,653	+		MIT1002_01150	0.25	+0.1
1,262,653	+		MIT1002_01150	0.25	+0.2
1,262,653	+		MIT1002_01150	0.25	-0.1
1,262,653	+		MIT1002_01150	0.25	-2.6
1,262,661	-		MIT1002_01150	0.27	+0.9
1,262,661	-		MIT1002_01150	0.27	-0.8
1,262,661	-		MIT1002_01150	0.27	-1.8
1,262,706	+		MIT1002_01150	0.37	-0.6
1,262,714	-		MIT1002_01150	0.38	-0.1
1,262,795	+		MIT1002_01150	0.56	-4.1
1,262,809	-		MIT1002_01150	0.59	-0.3
1,262,894	+		MIT1002_01150	0.77	-1.0
1,262,901	+		MIT1002_01150	0.78	-0.4
1,262,923	+		MIT1002_01150	0.83	-1.0
1,263,139	-				-0.6
1,263,146	-				-0.1
1,263,187	+				-0.0
1,263,195	-				-1.8
1,263,203	-				-1.2
1,263,286	-				+1.5
1,263,407	+				+0.2
1,263,415	-				-0.2
1,263,427	+		MIT1002_01151	0.11	-2.1
1,263,468	+		MIT1002_01151	0.15	-0.3
1,263,477	-		MIT1002_01151	0.16	+0.5