Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00130

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 1
139,555	-		MIT1002_00129	0.21	-0.3
139,569	-		MIT1002_00129	0.22	+2.1
139,590	-		MIT1002_00129	0.25	+0.9
139,610	+		MIT1002_00129	0.27	-0.1
139,632	-		MIT1002_00129	0.29	+0.3
139,643	+		MIT1002_00129	0.31	+0.4
139,691	+		MIT1002_00129	0.36	-0.2
139,788	+		MIT1002_00129	0.47	+0.4
139,789	-		MIT1002_00129	0.47	-0.1
139,796	-		MIT1002_00129	0.48	+1.2
139,796	-		MIT1002_00129	0.48	+0.8
139,796	-		MIT1002_00129	0.48	+0.8
139,813	+		MIT1002_00129	0.50	+1.5
139,821	-		MIT1002_00129	0.51	+0.8
139,847	-		MIT1002_00129	0.54	-0.9
139,915	+		MIT1002_00129	0.61	-1.0
139,989	-		MIT1002_00129	0.70	+1.3
140,039	-		MIT1002_00129	0.75	-1.0
140,115	-		MIT1002_00129	0.84	-0.5
140,118	-		MIT1002_00129	0.84	+0.2
140,175	+				+0.1
140,175	+				-0.8
140,175	+				+1.7
140,175	+				+0.3
140,183	-				+0.3
140,183	-				+1.0
140,183	-				-1.2
140,183	-				-0.1
140,183	-				+0.2
140,212	+				-0.4
140,212	+				+0.1
140,212	+				-0.1
140,212	+				-0.0
140,220	-				+0.8
140,220	-				+0.8
140,220	-				-0.5
140,220	-				+0.5
140,220	-				-0.1
140,220	-				+0.5
140,220	-				-0.6
140,220	-				+1.2
140,277	-				-1.0
140,368	+				+0.0
140,375	+				+0.2
140,410	+				-1.8
140,448	+				+0.4
140,537	+		MIT1002_00130	0.17	+0.3
140,558	+		MIT1002_00130	0.21	+0.4
140,588	+		MIT1002_00130	0.26	-1.6
140,596	-		MIT1002_00130	0.27	+0.4
140,596	-		MIT1002_00130	0.27	+0.1
140,596	-		MIT1002_00130	0.27	-0.0
140,596	-		MIT1002_00130	0.27	+0.4
140,596	-		MIT1002_00130	0.27	+0.0
140,598	+		MIT1002_00130	0.27	-1.1
140,603	+		MIT1002_00130	0.28	+1.2
140,604	-		MIT1002_00130	0.28	+0.0
140,627	+		MIT1002_00130	0.32	-0.3
140,659	+		MIT1002_00130	0.37	+0.0
140,660	+		MIT1002_00130	0.37	+0.2
140,813	-		MIT1002_00130	0.63	-0.7
140,827	-		MIT1002_00130	0.65	+0.2
140,914	+		MIT1002_00130	0.80	+0.2
140,914	+		MIT1002_00130	0.80	+0.2
140,914	+		MIT1002_00130	0.80	+0.0
140,924	+		MIT1002_00130	0.81	-0.0
140,945	+		MIT1002_00130	0.85	-0.2
140,957	+		MIT1002_00130	0.87	+0.2
140,992	-				+0.6
141,006	-				-0.8
141,141	+				+2.0
141,141	+				+0.3
141,150	-				-0.5
141,170	+				+0.9
141,265	+		MIT1002_00131	0.36	+0.6
141,325	+		MIT1002_00131	0.54	+0.5
141,333	-		MIT1002_00131	0.57	+2.4
141,333	-		MIT1002_00131	0.57	-0.5
141,335	+		MIT1002_00131	0.58	-2.0
141,343	-		MIT1002_00131	0.60	-0.3
141,449	+				-0.6
141,457	-				+1.0
141,478	-				+1.6
141,548	-				+0.3
141,711	+		MIT1002_00132	0.36	-1.4
141,729	+		MIT1002_00132	0.40	+0.1
141,729	+		MIT1002_00132	0.40	+1.0
141,737	+		MIT1002_00132	0.42	-0.5
141,737	+		MIT1002_00132	0.42	-0.2
141,739	+		MIT1002_00132	0.42	+0.1
141,811	-		MIT1002_00132	0.57	+0.6
141,915	-		MIT1002_00132	0.80	-2.1
141,922	-		MIT1002_00132	0.81	+0.6
141,965	+				+1.2
141,981	-				-2.3
142,000	-				-0.0
142,012	+				-1.0
142,017	+				-2.0
142,017	+				+0.4
142,025	-				-2.1
142,035	-				+0.0