Experiment: L-Rhamnose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS31360 and QEN71_RS31365 are separated by 150 nucleotides QEN71_RS31365 and QEN71_RS31370 are separated by 381 nucleotides
QEN71_RS31360: QEN71_RS31360 - MFS transporter, at 383,475 to 384,776
_RS31360
QEN71_RS31365: QEN71_RS31365 - MFS transporter, at 384,927 to 386,192
_RS31365
QEN71_RS31370: QEN71_RS31370 - aldehyde dehydrogenase (NADP(+)), at 386,574 to 388,175
_RS31370
Position (kb) 384
385
386
387 Strain fitness (log2 ratio) -2
-1
0
1 at 384.175 kb on - strand, within QEN71_RS31360 at 384.180 kb on + strand, within QEN71_RS31360 at 384.181 kb on - strand, within QEN71_RS31360 at 384.193 kb on - strand, within QEN71_RS31360 at 384.193 kb on - strand, within QEN71_RS31360 at 384.216 kb on + strand, within QEN71_RS31360 at 384.417 kb on + strand, within QEN71_RS31360 at 384.457 kb on + strand, within QEN71_RS31360 at 384.630 kb on + strand, within QEN71_RS31360 at 384.631 kb on - strand, within QEN71_RS31360 at 384.996 kb on + strand at 384.996 kb on + strand at 385.083 kb on + strand, within QEN71_RS31365 at 385.084 kb on - strand, within QEN71_RS31365 at 385.482 kb on + strand, within QEN71_RS31365 at 385.482 kb on + strand, within QEN71_RS31365 at 385.524 kb on + strand, within QEN71_RS31365 at 385.546 kb on - strand, within QEN71_RS31365 at 385.546 kb on - strand, within QEN71_RS31365 at 386.173 kb on - strand at 386.254 kb on + strand at 386.254 kb on + strand at 386.255 kb on - strand at 386.255 kb on - strand at 386.261 kb on - strand at 386.261 kb on - strand at 386.517 kb on - strand at 386.748 kb on + strand, within QEN71_RS31370
Per-strain Table
Position Strand Gene LocusTag Fraction L-Rhamnose (C) remove 384,175 - QEN71_RS31360 0.54 +0.5 384,180 + QEN71_RS31360 0.54 +0.6 384,181 - QEN71_RS31360 0.54 +0.0 384,193 - QEN71_RS31360 0.55 -1.4 384,193 - QEN71_RS31360 0.55 +0.1 384,216 + QEN71_RS31360 0.57 -1.2 384,417 + QEN71_RS31360 0.72 -0.8 384,457 + QEN71_RS31360 0.75 -1.5 384,630 + QEN71_RS31360 0.89 -0.6 384,631 - QEN71_RS31360 0.89 -1.3 384,996 + +0.2 384,996 + +0.2 385,083 + QEN71_RS31365 0.12 -0.8 385,084 - QEN71_RS31365 0.12 -0.5 385,482 + QEN71_RS31365 0.44 +0.2 385,482 + QEN71_RS31365 0.44 -0.4 385,524 + QEN71_RS31365 0.47 +0.2 385,546 - QEN71_RS31365 0.49 -0.2 385,546 - QEN71_RS31365 0.49 +0.5 386,173 - -2.1 386,254 + -2.0 386,254 + -0.3 386,255 - +0.0 386,255 - -1.3 386,261 - +1.2 386,261 - -1.1 386,517 - -0.1 386,748 + QEN71_RS31370 0.11 -0.2
Or see this region's nucleotide sequence