Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS28410

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
6,300,676	+		QEN71_RS28400	0.82	-0.8
6,300,676	+		QEN71_RS28400	0.82	-0.6
6,300,676	+		QEN71_RS28400	0.82	-0.3
6,300,676	+		QEN71_RS28400	0.82	-0.4
6,300,677	-		QEN71_RS28400	0.82	-1.2
6,300,694	+		QEN71_RS28400	0.88	-0.1
6,300,694	+		QEN71_RS28400	0.88	-0.2
6,300,694	+		QEN71_RS28400	0.88	-0.3
6,300,694	+		QEN71_RS28400	0.88	-0.4
6,300,694	+		QEN71_RS28400	0.88	-0.6
6,300,694	+		QEN71_RS28400	0.88	+0.1
6,300,694	+		QEN71_RS28400	0.88	+0.1
6,300,694	+		QEN71_RS28400	0.88	-0.6
6,300,695	-		QEN71_RS28400	0.89	-1.7
6,300,695	-		QEN71_RS28400	0.89	-1.1
6,300,695	-		QEN71_RS28400	0.89	-0.8
6,300,695	-		QEN71_RS28400	0.89	-1.8
6,300,695	-		QEN71_RS28400	0.89	-0.4
6,300,695	-		QEN71_RS28400	0.89	-0.9
6,300,695	-		QEN71_RS28400	0.89	-0.9
6,300,695	-		QEN71_RS28400	0.89	-0.5
6,300,695	-		QEN71_RS28400	0.89	+0.2
6,300,695	-		QEN71_RS28400	0.89	-1.2
6,300,695	-		QEN71_RS28400	0.89	-0.6
6,300,695	-		QEN71_RS28400	0.89	-1.3
6,300,695	-		QEN71_RS28400	0.89	-0.6
6,300,695	-		QEN71_RS28400	0.89	-1.3
6,300,724	+				-0.5
6,300,724	+				-0.3
6,300,724	+				+0.3
6,300,724	+				-0.0
6,300,724	+				-0.7
6,300,724	+				+0.3
6,300,724	+				+0.3
6,300,724	+				+1.4
6,300,724	+				-0.5
6,300,724	+				-0.7
6,300,724	+				+1.0
6,300,724	+				-0.1
6,300,724	+				-0.6
6,300,724	+				+0.2
6,300,724	+				+0.1
6,300,724	+				+0.0
6,300,724	+				+0.5
6,300,725	-				-0.6
6,300,725	-				+0.5
6,300,725	-				-0.5
6,300,725	-				-1.0
6,300,725	-				-0.8
6,300,725	-				+0.2
6,300,725	-				-0.2
6,300,725	-				-0.6
6,300,725	-				-2.2
6,300,725	-				-0.2
6,300,725	-				-0.6
6,300,725	-				+0.2
6,300,744	+				+0.2
6,300,744	+				+0.1
6,300,744	+				-0.8
6,300,745	-				+0.1
6,300,745	-				-1.2
6,300,751	-				+1.1
6,300,751	-				-0.9
6,300,772	+				-1.2
6,300,772	+				-2.0
6,300,772	+				+0.8
6,300,772	+				-0.1
6,300,772	+				-0.5
6,300,772	+				-0.6
6,300,773	-				-0.8
6,300,773	-				-0.5
6,300,773	-				-0.9
6,300,773	-				-1.0
6,300,773	-				-0.8
6,300,773	-				-1.0
6,300,911	-		QEN71_RS28405	0.21	+0.5
6,300,911	-		QEN71_RS28405	0.21	+2.4
6,300,911	-		QEN71_RS28405	0.21	-0.6
6,300,911	-		QEN71_RS28405	0.21	-1.3
6,300,911	-		QEN71_RS28405	0.21	-1.3
6,300,911	-		QEN71_RS28405	0.21	-0.6
6,300,970	+		QEN71_RS28405	0.28	-0.3
6,300,970	+		QEN71_RS28405	0.28	-1.2
6,301,006	+		QEN71_RS28405	0.32	-0.6
6,301,006	+		QEN71_RS28405	0.32	-0.0
6,301,006	+		QEN71_RS28405	0.32	-0.5
6,301,006	+		QEN71_RS28405	0.32	+0.0
6,301,006	+		QEN71_RS28405	0.32	-0.5
6,301,006	+		QEN71_RS28405	0.32	-0.8
6,301,006	+		QEN71_RS28405	0.32	-0.7
6,301,006	+		QEN71_RS28405	0.32	-0.8
6,301,007	-		QEN71_RS28405	0.33	-0.8
6,301,007	-		QEN71_RS28405	0.33	-0.5
6,301,007	-		QEN71_RS28405	0.33	-0.7
6,301,007	-		QEN71_RS28405	0.33	-0.2
6,301,007	-		QEN71_RS28405	0.33	-0.5
6,301,007	-		QEN71_RS28405	0.33	+0.3
6,301,069	+		QEN71_RS28405	0.40	-0.5
6,301,069	+		QEN71_RS28405	0.40	-0.6
6,301,070	-		QEN71_RS28405	0.40	+1.8
6,301,099	+		QEN71_RS28405	0.44	-2.2
6,301,099	+		QEN71_RS28405	0.44	-0.9
6,301,099	+		QEN71_RS28405	0.44	-0.9
6,301,100	-		QEN71_RS28405	0.44	-0.4
6,301,100	-		QEN71_RS28405	0.44	-1.0
6,301,119	+		QEN71_RS28405	0.47	-0.5
6,301,119	+		QEN71_RS28405	0.47	-0.2
6,301,119	+		QEN71_RS28405	0.47	+0.7
6,301,119	+		QEN71_RS28405	0.47	-0.5
6,301,119	+		QEN71_RS28405	0.47	-0.6
6,301,119	+		QEN71_RS28405	0.47	-2.7
6,301,119	+		QEN71_RS28405	0.47	-2.0
6,301,119	+		QEN71_RS28405	0.47	-0.7
6,301,119	+		QEN71_RS28405	0.47	-0.9
6,301,119	+		QEN71_RS28405	0.47	+0.1
6,301,119	+		QEN71_RS28405	0.47	-0.4
6,301,119	+		QEN71_RS28405	0.47	+3.1
6,301,119	+		QEN71_RS28405	0.47	-0.7
6,301,119	+		QEN71_RS28405	0.47	-1.0
6,301,119	+		QEN71_RS28405	0.47	-0.2
6,301,119	+		QEN71_RS28405	0.47	-1.1
6,301,119	+		QEN71_RS28405	0.47	-0.9
6,301,119	+		QEN71_RS28405	0.47	-1.3
6,301,119	+		QEN71_RS28405	0.47	-0.9
6,301,119	+		QEN71_RS28405	0.47	-1.3
6,301,119	+		QEN71_RS28405	0.47	-0.5
6,301,119	+		QEN71_RS28405	0.47	-0.0
6,301,119	+		QEN71_RS28405	0.47	+0.2
6,301,119	+		QEN71_RS28405	0.47	-1.3
6,301,119	+		QEN71_RS28405	0.47	-1.0
6,301,119	+		QEN71_RS28405	0.47	-0.7
6,301,119	+		QEN71_RS28405	0.47	-1.2
6,301,119	+		QEN71_RS28405	0.47	-0.4
6,301,120	-		QEN71_RS28405	0.47	-0.6
6,301,120	-		QEN71_RS28405	0.47	-0.7
6,301,120	-		QEN71_RS28405	0.47	-1.2
6,301,120	-		QEN71_RS28405	0.47	-0.9
6,301,120	-		QEN71_RS28405	0.47	+0.0
6,301,120	-		QEN71_RS28405	0.47	-1.3
6,301,120	-		QEN71_RS28405	0.47	-0.0
6,301,120	-		QEN71_RS28405	0.47	-1.6
6,301,120	-		QEN71_RS28405	0.47	-0.7
6,301,120	-		QEN71_RS28405	0.47	-0.0
6,301,120	-		QEN71_RS28405	0.47	-0.2
6,301,120	-		QEN71_RS28405	0.47	-0.8
6,301,120	-		QEN71_RS28405	0.47	-0.8
6,301,120	-		QEN71_RS28405	0.47	-0.6
6,301,120	-		QEN71_RS28405	0.47	+0.2
6,301,120	-		QEN71_RS28405	0.47	-0.9
6,301,120	-		QEN71_RS28405	0.47	-1.4
6,301,120	-		QEN71_RS28405	0.47	-0.2
6,301,120	-		QEN71_RS28405	0.47	-1.7
6,301,120	-		QEN71_RS28405	0.47	-1.2
6,301,120	-		QEN71_RS28405	0.47	-0.6
6,301,120	-		QEN71_RS28405	0.47	-0.7
6,301,120	-		QEN71_RS28405	0.47	-1.5
6,301,120	-		QEN71_RS28405	0.47	-0.5
6,301,195	+		QEN71_RS28405	0.56	+0.0
6,301,195	+		QEN71_RS28405	0.56	+0.6
6,301,195	+		QEN71_RS28405	0.56	-0.6
6,301,195	+		QEN71_RS28405	0.56	-0.2
6,301,195	+		QEN71_RS28405	0.56	-0.9
6,301,196	-		QEN71_RS28405	0.56	-1.2
6,301,196	-		QEN71_RS28405	0.56	-0.9
6,301,196	-		QEN71_RS28405	0.56	-0.3
6,301,196	-		QEN71_RS28405	0.56	-1.9
6,301,196	-		QEN71_RS28405	0.56	-0.6
6,301,282	+		QEN71_RS28405	0.67	-0.1
6,301,282	+		QEN71_RS28405	0.67	-0.5
6,301,282	+		QEN71_RS28405	0.67	-0.8
6,301,283	-		QEN71_RS28405	0.67	-0.1
6,301,294	+		QEN71_RS28405	0.68	-0.7
6,301,294	+		QEN71_RS28405	0.68	-1.0
6,301,295	-		QEN71_RS28405	0.68	+0.1
6,301,295	-		QEN71_RS28405	0.68	-1.3
6,301,295	-		QEN71_RS28405	0.68	-0.1
6,301,315	-		QEN71_RS28405	0.71	-1.0
6,301,754	+		QEN71_RS28410	0.32	-0.0
6,301,754	+		QEN71_RS28410	0.32	-0.6
6,301,754	+		QEN71_RS28410	0.32	+0.0
6,301,755	-		QEN71_RS28410	0.32	-0.3
6,301,755	-		QEN71_RS28410	0.32	-0.8
6,301,755	-		QEN71_RS28410	0.32	-0.4
6,301,755	-		QEN71_RS28410	0.32	-0.3
6,302,087	+				-1.6
6,302,087	+				-0.3
6,302,087	+				-2.1
6,302,088	-				-0.2
6,302,088	-				-1.1
6,302,088	-				-1.2
6,302,120	+				-0.5
6,302,120	+				+0.0
6,302,120	+				+0.3
6,302,120	+				-0.5
6,302,120	+				-2.9
6,302,120	+				-0.0
6,302,120	+				-0.5
6,302,121	-				+0.5
6,302,121	-				-0.9
6,302,121	-				-1.3
6,302,121	-				-0.4
6,302,121	-				-0.9
6,302,121	-				-0.4
6,302,132	+				-0.6
6,302,132	+				-0.4
6,302,132	+				-1.0
6,302,132	+				-0.8
6,302,132	+				+0.2
6,302,133	-				-0.3
6,302,133	-				-1.0
6,302,138	+				-0.9
6,302,138	+				-1.0
6,302,285	+		QEN71_RS28415	0.13	-0.4
6,302,285	+		QEN71_RS28415	0.13	-1.4
6,302,286	-		QEN71_RS28415	0.13	-0.5
6,302,286	-		QEN71_RS28415	0.13	-0.5
6,302,286	-		QEN71_RS28415	0.13	-0.9
6,302,313	+		QEN71_RS28415	0.16	-0.3
6,302,314	-		QEN71_RS28415	0.16	-0.8
6,302,340	+		QEN71_RS28415	0.18	-1.4
6,302,340	+		QEN71_RS28415	0.18	+0.1
6,302,340	+		QEN71_RS28415	0.18	-1.1
6,302,340	+		QEN71_RS28415	0.18	-1.5
6,302,341	-		QEN71_RS28415	0.19	-0.4
6,302,341	-		QEN71_RS28415	0.19	-0.7
6,302,341	-		QEN71_RS28415	0.19	-0.5
6,302,414	+		QEN71_RS28415	0.25	-0.7
6,302,415	-		QEN71_RS28415	0.25	-0.1
6,302,415	-		QEN71_RS28415	0.25	+0.2
6,302,499	+		QEN71_RS28415	0.33	-0.2
6,302,499	+		QEN71_RS28415	0.33	-0.6
6,302,499	+		QEN71_RS28415	0.33	-0.9
6,302,499	+		QEN71_RS28415	0.33	+0.3
6,302,499	+		QEN71_RS28415	0.33	-1.0
6,302,499	+		QEN71_RS28415	0.33	+0.2
6,302,499	+		QEN71_RS28415	0.33	-0.5
6,302,499	+		QEN71_RS28415	0.33	-1.0
6,302,500	-		QEN71_RS28415	0.33	-0.1
6,302,500	-		QEN71_RS28415	0.33	-1.8
6,302,500	-		QEN71_RS28415	0.33	-0.3
6,302,500	-		QEN71_RS28415	0.33	-2.0
6,302,500	-		QEN71_RS28415	0.33	-2.1
6,302,500	-		QEN71_RS28415	0.33	-0.6
6,302,500	-		QEN71_RS28415	0.33	-0.5
6,302,500	-		QEN71_RS28415	0.33	-0.8
6,302,500	-		QEN71_RS28415	0.33	-0.5
6,302,500	-		QEN71_RS28415	0.33	-1.0
6,302,595	+		QEN71_RS28415	0.42	+0.4
6,302,595	+		QEN71_RS28415	0.42	-1.1
6,302,595	+		QEN71_RS28415	0.42	-0.7
6,302,596	-		QEN71_RS28415	0.42	-0.7
6,302,596	-		QEN71_RS28415	0.42	-1.7
6,302,596	-		QEN71_RS28415	0.42	-0.1
6,302,596	-		QEN71_RS28415	0.42	-0.7
6,302,596	-		QEN71_RS28415	0.42	-0.5
6,302,660	+		QEN71_RS28415	0.48	-0.7
6,302,660	+		QEN71_RS28415	0.48	-0.5
6,302,660	+		QEN71_RS28415	0.48	-0.7
6,302,660	+		QEN71_RS28415	0.48	-0.1
6,302,661	-		QEN71_RS28415	0.48	-1.3
6,302,679	+		QEN71_RS28415	0.50	-0.1
6,302,679	+		QEN71_RS28415	0.50	-0.4
6,302,679	+		QEN71_RS28415	0.50	-1.9
6,302,679	+		QEN71_RS28415	0.50	-2.8
6,302,679	+		QEN71_RS28415	0.50	-1.2
6,302,680	-		QEN71_RS28415	0.50	-2.2
6,302,680	-		QEN71_RS28415	0.50	+0.0
6,302,680	-		QEN71_RS28415	0.50	-0.8
6,302,680	-		QEN71_RS28415	0.50	-0.3
6,302,680	-		QEN71_RS28415	0.50	-0.6
6,302,680	-		QEN71_RS28415	0.50	-1.7
6,302,680	-		QEN71_RS28415	0.50	-0.0
6,302,680	-		QEN71_RS28415	0.50	+2.1
6,303,000	+		QEN71_RS28415	0.79	-0.4
6,303,001	-		QEN71_RS28415	0.79	-1.3
6,303,129	+				-0.6
6,303,129	+				-0.8
6,303,129	+				-2.3
6,303,129	+				-1.1
6,303,129	+				-0.8
6,303,129	+				-0.5
6,303,129	+				+0.1
6,303,130	-				-0.9
6,303,130	-				-0.6
6,303,130	-				-0.4
6,303,130	-				+0.2
6,303,130	-				+0.2
6,303,130	-				-0.9
6,303,130	-				-1.3
6,303,130	-				+0.5
6,303,130	-				+0.1