Experiment: L-Rhamnose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS21955 and QEN71_RS21960 are separated by 98 nucleotides QEN71_RS21960 and QEN71_RS21965 are separated by 41 nucleotides QEN71_RS21965 and QEN71_RS21970 are separated by 68 nucleotides QEN71_RS21970 and QEN71_RS21975 are separated by 362 nucleotides
QEN71_RS21955: QEN71_RS21955 - SurA N-terminal domain-containing protein, at 4,871,569 to 4,873,497
_RS21955
QEN71_RS21960: QEN71_RS21960 - tRNA-Asp, at 4,873,596 to 4,873,672
_RS21960
QEN71_RS21965: QEN71_RS21965 - tRNA-Val, at 4,873,714 to 4,873,789
_RS21965
QEN71_RS21970: QEN71_RS21970 - HU family DNA-binding protein, at 4,873,858 to 4,874,130
_RS21970
QEN71_RS21975: QEN71_RS21975 - endopeptidase La, at 4,874,493 to 4,876,910
_RS21975
Position (kb) 4873
4874 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4872.722 kb on + strand, within QEN71_RS21955 at 4872.722 kb on + strand, within QEN71_RS21955 at 4872.723 kb on - strand, within QEN71_RS21955 at 4872.723 kb on - strand, within QEN71_RS21955 at 4872.723 kb on - strand, within QEN71_RS21955 at 4872.791 kb on + strand, within QEN71_RS21955 at 4872.792 kb on - strand, within QEN71_RS21955 at 4872.792 kb on - strand, within QEN71_RS21955 at 4872.792 kb on - strand, within QEN71_RS21955 at 4872.842 kb on + strand, within QEN71_RS21955 at 4872.842 kb on + strand, within QEN71_RS21955 at 4872.843 kb on - strand, within QEN71_RS21955 at 4872.843 kb on - strand, within QEN71_RS21955 at 4872.843 kb on - strand, within QEN71_RS21955 at 4872.843 kb on - strand, within QEN71_RS21955 at 4872.843 kb on - strand, within QEN71_RS21955 at 4872.843 kb on - strand, within QEN71_RS21955 at 4872.843 kb on - strand, within QEN71_RS21955 at 4872.843 kb on - strand, within QEN71_RS21955 at 4872.843 kb on - strand, within QEN71_RS21955 at 4872.843 kb on - strand, within QEN71_RS21955 at 4872.843 kb on - strand, within QEN71_RS21955 at 4872.843 kb on - strand, within QEN71_RS21955 at 4872.843 kb on - strand, within QEN71_RS21955 at 4872.845 kb on + strand, within QEN71_RS21955 at 4872.887 kb on + strand, within QEN71_RS21955 at 4872.887 kb on + strand, within QEN71_RS21955 at 4872.887 kb on + strand, within QEN71_RS21955 at 4872.887 kb on + strand, within QEN71_RS21955 at 4872.888 kb on - strand, within QEN71_RS21955 at 4872.888 kb on - strand, within QEN71_RS21955 at 4872.888 kb on - strand, within QEN71_RS21955 at 4873.022 kb on + strand, within QEN71_RS21955 at 4873.022 kb on + strand, within QEN71_RS21955 at 4873.022 kb on + strand, within QEN71_RS21955 at 4873.022 kb on + strand, within QEN71_RS21955 at 4873.040 kb on + strand, within QEN71_RS21955 at 4873.040 kb on + strand, within QEN71_RS21955 at 4873.040 kb on + strand, within QEN71_RS21955 at 4873.041 kb on - strand, within QEN71_RS21955 at 4873.082 kb on + strand, within QEN71_RS21955 at 4873.082 kb on + strand, within QEN71_RS21955 at 4873.083 kb on - strand, within QEN71_RS21955 at 4873.083 kb on - strand, within QEN71_RS21955 at 4873.542 kb on - strand at 4873.542 kb on - strand at 4873.542 kb on - strand at 4873.544 kb on + strand at 4873.544 kb on + strand at 4873.544 kb on + strand at 4873.544 kb on + strand at 4873.544 kb on + strand at 4873.544 kb on + strand at 4873.544 kb on + strand at 4873.544 kb on + strand at 4873.545 kb on - strand at 4873.545 kb on - strand at 4873.545 kb on - strand at 4873.545 kb on - strand at 4873.545 kb on - strand at 4873.545 kb on - strand at 4873.545 kb on - strand at 4873.545 kb on - strand at 4873.589 kb on - strand at 4873.589 kb on - strand at 4873.589 kb on - strand at 4873.589 kb on - strand at 4873.684 kb on - strand at 4873.684 kb on - strand at 4873.684 kb on - strand at 4873.684 kb on - strand at 4873.684 kb on - strand at 4873.684 kb on - strand at 4873.684 kb on - strand at 4873.837 kb on - strand at 4873.837 kb on - strand at 4873.837 kb on - strand at 4873.837 kb on - strand at 4873.860 kb on - strand at 4873.860 kb on - strand at 4873.894 kb on - strand, within QEN71_RS21970 at 4874.124 kb on + strand at 4874.124 kb on + strand at 4874.125 kb on - strand at 4874.125 kb on - strand at 4874.125 kb on - strand at 4874.173 kb on + strand at 4874.185 kb on + strand at 4874.185 kb on + strand at 4874.185 kb on + strand at 4874.186 kb on - strand at 4874.187 kb on + strand at 4874.187 kb on + strand at 4874.187 kb on + strand at 4874.187 kb on + strand at 4874.187 kb on + strand at 4874.187 kb on + strand at 4874.187 kb on + strand at 4874.187 kb on + strand at 4874.187 kb on + strand at 4874.188 kb on - strand at 4874.188 kb on - strand at 4874.188 kb on - strand at 4874.188 kb on - strand at 4874.188 kb on - strand at 4874.188 kb on - strand at 4874.188 kb on - strand at 4874.188 kb on - strand at 4874.188 kb on - strand at 4874.189 kb on + strand at 4874.189 kb on + strand at 4874.190 kb on - strand at 4874.190 kb on - strand at 4874.190 kb on - strand at 4874.221 kb on - strand at 4874.221 kb on - strand at 4874.221 kb on - strand at 4874.221 kb on - strand at 4874.221 kb on - strand at 4874.221 kb on - strand at 4874.341 kb on + strand at 4874.341 kb on + strand at 4874.358 kb on + strand at 4874.365 kb on + strand at 4874.384 kb on + strand at 4874.384 kb on + strand at 4874.384 kb on + strand at 4874.384 kb on + strand at 4874.385 kb on - strand at 4874.385 kb on - strand at 4874.385 kb on - strand at 4874.385 kb on - strand at 4874.409 kb on + strand at 4874.418 kb on - strand at 4874.494 kb on + strand at 4874.494 kb on + strand at 4874.495 kb on - strand at 4874.495 kb on - strand at 4874.495 kb on - strand at 4874.495 kb on - strand at 4874.495 kb on - strand at 4874.495 kb on - strand at 4874.495 kb on - strand at 4874.503 kb on - strand at 4874.503 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Rhamnose (C) remove 4,872,722 + QEN71_RS21955 0.60 +1.4 4,872,722 + QEN71_RS21955 0.60 +0.1 4,872,723 - QEN71_RS21955 0.60 +0.8 4,872,723 - QEN71_RS21955 0.60 +1.3 4,872,723 - QEN71_RS21955 0.60 -0.3 4,872,791 + QEN71_RS21955 0.63 -0.2 4,872,792 - QEN71_RS21955 0.63 -0.8 4,872,792 - QEN71_RS21955 0.63 -1.3 4,872,792 - QEN71_RS21955 0.63 +0.2 4,872,842 + QEN71_RS21955 0.66 +1.0 4,872,842 + QEN71_RS21955 0.66 +1.4 4,872,843 - QEN71_RS21955 0.66 +0.3 4,872,843 - QEN71_RS21955 0.66 +0.7 4,872,843 - QEN71_RS21955 0.66 -0.5 4,872,843 - QEN71_RS21955 0.66 +1.0 4,872,843 - QEN71_RS21955 0.66 +0.6 4,872,843 - QEN71_RS21955 0.66 +0.4 4,872,843 - QEN71_RS21955 0.66 +1.6 4,872,843 - QEN71_RS21955 0.66 +0.3 4,872,843 - QEN71_RS21955 0.66 +1.4 4,872,843 - QEN71_RS21955 0.66 +0.9 4,872,843 - QEN71_RS21955 0.66 +0.8 4,872,843 - QEN71_RS21955 0.66 +0.9 4,872,843 - QEN71_RS21955 0.66 +0.5 4,872,845 + QEN71_RS21955 0.66 +0.1 4,872,887 + QEN71_RS21955 0.68 +1.1 4,872,887 + QEN71_RS21955 0.68 +0.8 4,872,887 + QEN71_RS21955 0.68 -0.5 4,872,887 + QEN71_RS21955 0.68 -0.3 4,872,888 - QEN71_RS21955 0.68 +0.7 4,872,888 - QEN71_RS21955 0.68 +1.2 4,872,888 - QEN71_RS21955 0.68 +0.2 4,873,022 + QEN71_RS21955 0.75 +2.3 4,873,022 + QEN71_RS21955 0.75 +0.3 4,873,022 + QEN71_RS21955 0.75 +0.9 4,873,022 + QEN71_RS21955 0.75 +0.3 4,873,040 + QEN71_RS21955 0.76 -0.6 4,873,040 + QEN71_RS21955 0.76 +1.1 4,873,040 + QEN71_RS21955 0.76 +0.9 4,873,041 - QEN71_RS21955 0.76 +0.9 4,873,082 + QEN71_RS21955 0.78 +1.2 4,873,082 + QEN71_RS21955 0.78 +1.3 4,873,083 - QEN71_RS21955 0.78 +2.3 4,873,083 - QEN71_RS21955 0.78 -1.2 4,873,542 - -0.6 4,873,542 - -0.7 4,873,542 - -2.8 4,873,544 + +1.3 4,873,544 + +0.4 4,873,544 + -1.6 4,873,544 + +2.2 4,873,544 + +0.8 4,873,544 + -0.0 4,873,544 + +1.4 4,873,544 + +1.8 4,873,545 - -1.0 4,873,545 - +0.2 4,873,545 - -0.7 4,873,545 - -0.1 4,873,545 - -0.3 4,873,545 - +0.3 4,873,545 - +0.4 4,873,545 - -2.1 4,873,589 - +0.2 4,873,589 - -0.3 4,873,589 - -0.4 4,873,589 - +1.3 4,873,684 - -0.1 4,873,684 - -0.3 4,873,684 - -0.7 4,873,684 - -0.6 4,873,684 - +0.4 4,873,684 - -0.1 4,873,684 - -0.5 4,873,837 - +0.1 4,873,837 - +2.3 4,873,837 - +1.6 4,873,837 - -0.4 4,873,860 - -0.5 4,873,860 - -0.7 4,873,894 - QEN71_RS21970 0.13 +1.2 4,874,124 + +0.1 4,874,124 + -1.0 4,874,125 - +0.7 4,874,125 - +0.1 4,874,125 - -0.4 4,874,173 + +0.4 4,874,185 + -0.2 4,874,185 + -1.6 4,874,185 + +0.1 4,874,186 - +0.2 4,874,187 + -0.9 4,874,187 + -0.0 4,874,187 + +0.8 4,874,187 + +0.9 4,874,187 + -0.2 4,874,187 + +0.3 4,874,187 + -0.0 4,874,187 + -1.3 4,874,187 + +0.2 4,874,188 - -1.2 4,874,188 - +1.2 4,874,188 - -0.7 4,874,188 - +0.1 4,874,188 - -0.6 4,874,188 - +0.5 4,874,188 - -1.3 4,874,188 - +0.7 4,874,188 - -1.0 4,874,189 + +1.2 4,874,189 + +0.4 4,874,190 - -0.7 4,874,190 - -0.9 4,874,190 - -0.0 4,874,221 - -1.8 4,874,221 - -0.6 4,874,221 - -1.2 4,874,221 - +0.7 4,874,221 - -0.5 4,874,221 - -0.7 4,874,341 + -0.7 4,874,341 + -2.5 4,874,358 + +0.5 4,874,365 + -0.7 4,874,384 + +0.0 4,874,384 + +0.0 4,874,384 + -0.8 4,874,384 + -0.8 4,874,385 - -1.4 4,874,385 - +1.4 4,874,385 - +0.2 4,874,385 - +0.2 4,874,409 + +0.4 4,874,418 - -0.2 4,874,494 + +0.2 4,874,494 + +0.8 4,874,495 - +0.3 4,874,495 - -1.2 4,874,495 - -0.1 4,874,495 - -1.0 4,874,495 - -0.2 4,874,495 - -0.1 4,874,495 - +0.0 4,874,503 - +1.6 4,874,503 - +2.0
Or see this region's nucleotide sequence