Experiment: L-Rhamnose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS18615 and QEN71_RS18620 are separated by 154 nucleotides
QEN71_RS18615: QEN71_RS18615 - IS110 family transposase, at 4,144,876 to 4,145,889
_RS18615
QEN71_RS18620: QEN71_RS18620 - HAD-IA family hydrolase, at 4,146,044 to 4,146,661
_RS18620
Position (kb)
4144
4145
4146 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4143.961 kb on - strand at 4143.961 kb on - strand at 4143.988 kb on + strand at 4143.988 kb on + strand at 4143.992 kb on + strand at 4144.002 kb on + strand at 4144.002 kb on + strand at 4144.003 kb on - strand at 4144.016 kb on + strand at 4144.016 kb on + strand at 4144.016 kb on + strand at 4144.016 kb on + strand at 4144.016 kb on + strand at 4144.017 kb on - strand at 4144.017 kb on - strand at 4144.017 kb on - strand at 4144.017 kb on - strand at 4144.017 kb on - strand at 4144.017 kb on - strand at 4144.017 kb on - strand at 4144.017 kb on - strand at 4144.020 kb on + strand at 4144.020 kb on + strand at 4144.020 kb on + strand at 4144.020 kb on + strand at 4144.020 kb on + strand at 4144.020 kb on + strand at 4144.020 kb on + strand at 4144.020 kb on + strand at 4144.020 kb on + strand at 4144.020 kb on + strand at 4144.020 kb on + strand at 4144.020 kb on + strand at 4144.020 kb on + strand at 4144.020 kb on + strand at 4144.020 kb on + strand at 4144.020 kb on + strand at 4144.020 kb on + strand at 4144.021 kb on - strand at 4144.021 kb on - strand at 4144.021 kb on - strand at 4144.021 kb on - strand at 4144.021 kb on - strand at 4144.021 kb on - strand at 4144.021 kb on - strand at 4144.021 kb on - strand at 4144.021 kb on - strand at 4144.021 kb on - strand at 4144.021 kb on - strand at 4144.021 kb on - strand at 4144.021 kb on - strand at 4144.021 kb on - strand at 4144.021 kb on - strand at 4144.021 kb on - strand at 4144.021 kb on - strand at 4144.021 kb on - strand at 4144.021 kb on - strand at 4144.021 kb on - strand at 4144.021 kb on - strand at 4144.030 kb on - strand at 4144.093 kb on + strand at 4144.093 kb on + strand at 4144.094 kb on - strand at 4144.094 kb on - strand at 4144.097 kb on + strand at 4144.097 kb on + strand at 4144.097 kb on + strand at 4144.097 kb on + strand at 4144.098 kb on - strand at 4144.098 kb on - strand at 4144.267 kb on + strand at 4144.267 kb on + strand at 4144.268 kb on - strand at 4144.268 kb on - strand at 4144.276 kb on + strand at 4144.276 kb on + strand at 4144.277 kb on - strand at 4144.297 kb on - strand at 4144.404 kb on + strand at 4144.404 kb on + strand at 4144.404 kb on + strand at 4144.405 kb on - strand at 4144.405 kb on - strand at 4144.405 kb on - strand at 4144.405 kb on - strand at 4144.421 kb on + strand at 4144.422 kb on - strand at 4144.422 kb on - strand at 4144.422 kb on - strand at 4145.970 kb on + strand at 4145.996 kb on + strand at 4145.997 kb on - strand at 4145.997 kb on - strand at 4146.048 kb on + strand at 4146.048 kb on + strand at 4146.048 kb on + strand at 4146.048 kb on + strand at 4146.049 kb on - strand at 4146.049 kb on - strand at 4146.057 kb on + strand at 4146.058 kb on - strand at 4146.058 kb on - strand at 4146.058 kb on - strand at 4146.068 kb on + strand at 4146.068 kb on + strand at 4146.068 kb on + strand at 4146.069 kb on - strand at 4146.069 kb on - strand at 4146.069 kb on - strand at 4146.079 kb on - strand at 4146.079 kb on - strand at 4146.091 kb on + strand at 4146.212 kb on - strand, within QEN71_RS18620 at 4146.341 kb on + strand, within QEN71_RS18620 at 4146.341 kb on + strand, within QEN71_RS18620 at 4146.341 kb on + strand, within QEN71_RS18620 at 4146.342 kb on - strand, within QEN71_RS18620 at 4146.342 kb on - strand, within QEN71_RS18620 at 4146.376 kb on + strand, within QEN71_RS18620 at 4146.376 kb on + strand, within QEN71_RS18620 at 4146.391 kb on - strand, within QEN71_RS18620 at 4146.429 kb on + strand, within QEN71_RS18620 at 4146.430 kb on - strand, within QEN71_RS18620 at 4146.502 kb on + strand, within QEN71_RS18620 at 4146.504 kb on + strand, within QEN71_RS18620 at 4146.504 kb on + strand, within QEN71_RS18620 at 4146.504 kb on + strand, within QEN71_RS18620 at 4146.505 kb on - strand, within QEN71_RS18620 at 4146.505 kb on - strand, within QEN71_RS18620 at 4146.505 kb on - strand, within QEN71_RS18620 at 4146.505 kb on - strand, within QEN71_RS18620 at 4146.613 kb on + strand at 4146.613 kb on + strand at 4146.614 kb on - strand at 4146.614 kb on - strand at 4146.614 kb on - strand at 4146.655 kb on - strand at 4146.659 kb on + strand at 4146.659 kb on + strand at 4146.659 kb on + strand at 4146.659 kb on + strand at 4146.660 kb on - strand at 4146.660 kb on - strand at 4146.767 kb on + strand at 4146.768 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Rhamnose (C) remove 4,143,961 - -0.8 4,143,961 - -0.7 4,143,988 + -0.0 4,143,988 + -0.4 4,143,992 + +0.6 4,144,002 + -0.7 4,144,002 + -1.0 4,144,003 - -1.6 4,144,016 + +0.1 4,144,016 + -0.8 4,144,016 + +1.5 4,144,016 + -0.5 4,144,016 + +1.5 4,144,017 - +0.5 4,144,017 - -2.2 4,144,017 - -0.3 4,144,017 - -0.4 4,144,017 - +0.0 4,144,017 - -0.7 4,144,017 - -0.3 4,144,017 - +0.3 4,144,020 + +0.8 4,144,020 + -0.2 4,144,020 + +0.9 4,144,020 + +0.5 4,144,020 + +0.1 4,144,020 + -0.6 4,144,020 + -0.5 4,144,020 + +1.0 4,144,020 + +1.6 4,144,020 + -0.8 4,144,020 + +1.7 4,144,020 + +0.7 4,144,020 + -2.7 4,144,020 + -0.8 4,144,020 + -0.0 4,144,020 + -0.4 4,144,020 + -0.8 4,144,021 - -0.0 4,144,021 - -1.4 4,144,021 - +0.5 4,144,021 - -1.2 4,144,021 - -0.2 4,144,021 - +0.9 4,144,021 - +0.3 4,144,021 - +0.2 4,144,021 - -0.7 4,144,021 - -0.3 4,144,021 - +1.0 4,144,021 - -0.4 4,144,021 - +0.1 4,144,021 - -2.1 4,144,021 - -0.2 4,144,021 - +0.4 4,144,021 - -0.2 4,144,021 - -0.5 4,144,021 - +1.1 4,144,021 - -0.5 4,144,021 - +1.9 4,144,030 - -1.5 4,144,093 + +0.8 4,144,093 + -0.0 4,144,094 - +0.1 4,144,094 - -0.2 4,144,097 + +0.4 4,144,097 + -0.8 4,144,097 + -0.1 4,144,097 + +0.2 4,144,098 - -0.2 4,144,098 - -1.0 4,144,267 + -0.4 4,144,267 + +0.7 4,144,268 - -0.0 4,144,268 - -0.3 4,144,276 + +0.6 4,144,276 + -1.1 4,144,277 - -0.4 4,144,297 - -0.6 4,144,404 + +0.3 4,144,404 + -0.6 4,144,404 + -0.3 4,144,405 - +0.6 4,144,405 - +0.8 4,144,405 - -1.1 4,144,405 - +1.5 4,144,421 + -0.5 4,144,422 - -0.6 4,144,422 - -0.5 4,144,422 - +1.2 4,145,970 + -1.0 4,145,996 + -0.7 4,145,997 - +0.5 4,145,997 - +1.3 4,146,048 + -0.2 4,146,048 + +0.4 4,146,048 + +0.9 4,146,048 + +0.5 4,146,049 - +0.4 4,146,049 - -0.4 4,146,057 + -0.7 4,146,058 - +0.1 4,146,058 - -0.1 4,146,058 - -0.3 4,146,068 + +0.4 4,146,068 + -1.3 4,146,068 + -0.2 4,146,069 - -0.0 4,146,069 - +0.4 4,146,069 - +0.1 4,146,079 - -0.5 4,146,079 - +0.4 4,146,091 + -0.8 4,146,212 - QEN71_RS18620 0.27 -0.2 4,146,341 + QEN71_RS18620 0.48 -0.6 4,146,341 + QEN71_RS18620 0.48 -0.2 4,146,341 + QEN71_RS18620 0.48 +0.5 4,146,342 - QEN71_RS18620 0.48 +0.4 4,146,342 - QEN71_RS18620 0.48 -0.7 4,146,376 + QEN71_RS18620 0.54 -0.2 4,146,376 + QEN71_RS18620 0.54 -0.6 4,146,391 - QEN71_RS18620 0.56 +0.7 4,146,429 + QEN71_RS18620 0.62 -0.3 4,146,430 - QEN71_RS18620 0.62 -0.6 4,146,502 + QEN71_RS18620 0.74 -2.3 4,146,504 + QEN71_RS18620 0.74 -1.0 4,146,504 + QEN71_RS18620 0.74 -0.0 4,146,504 + QEN71_RS18620 0.74 -2.2 4,146,505 - QEN71_RS18620 0.75 -0.2 4,146,505 - QEN71_RS18620 0.75 -0.6 4,146,505 - QEN71_RS18620 0.75 +1.2 4,146,505 - QEN71_RS18620 0.75 +0.0 4,146,613 + -0.9 4,146,613 + -0.2 4,146,614 - +1.0 4,146,614 - +0.4 4,146,614 - -0.5 4,146,655 - -0.3 4,146,659 + +0.4 4,146,659 + -2.1 4,146,659 + -2.1 4,146,659 + +0.0 4,146,660 - +1.7 4,146,660 - +0.4 4,146,767 + +1.0 4,146,768 - -1.7
Or see this region's nucleotide sequence