Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS05470

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
1,208,926	+		QEN71_RS05465	0.60	+0.3
1,208,927	-		QEN71_RS05465	0.60	-0.9
1,208,941	+		QEN71_RS05465	0.61	-0.5
1,208,941	+		QEN71_RS05465	0.61	-0.6
1,208,942	-		QEN71_RS05465	0.61	+0.4
1,208,942	-		QEN71_RS05465	0.61	+1.0
1,209,284	-		QEN71_RS05465	0.82	+1.4
1,209,284	-		QEN71_RS05465	0.82	-2.9
1,209,284	-		QEN71_RS05465	0.82	-1.0
1,209,284	-		QEN71_RS05465	0.82	+0.3
1,209,298	+		QEN71_RS05465	0.83	-0.2
1,209,298	+		QEN71_RS05465	0.83	-0.4
1,209,298	+		QEN71_RS05465	0.83	+0.0
1,209,299	-		QEN71_RS05465	0.83	-1.0
1,209,299	-		QEN71_RS05465	0.83	+1.5
1,209,299	-		QEN71_RS05465	0.83	-1.9
1,209,552	+				+0.3
1,209,552	+				+0.7
1,209,552	+				-2.5
1,209,553	-				-0.6
1,209,553	-				-0.8
1,209,553	-				+1.2
1,209,553	-				-0.6
1,209,553	-				+1.5
1,209,553	-				+0.4
1,209,553	-				-0.3
1,209,611	+				-0.5
1,209,689	-				-0.6
1,209,689	-				-0.3
1,209,696	+				-0.3
1,209,696	+				-1.0
1,209,696	+				-0.3
1,209,696	+				-0.1
1,209,697	-				-0.2
1,209,697	-				+0.8
1,209,704	+				-0.6
1,209,704	+				-0.3
1,209,704	+				+0.2
1,209,704	+				-0.7
1,209,704	+				+0.0
1,209,704	+				-0.3
1,209,705	-				-0.3
1,209,705	-				+0.7
1,209,705	-				-0.1
1,209,705	-				+1.0
1,209,705	-				-0.5
1,209,705	-				-0.4
1,209,727	+				+1.7
1,209,727	+				+0.4
1,209,728	-				-1.1
1,209,728	-				-2.3
1,209,728	-				+0.0
1,209,728	-				-0.5
1,209,728	-				+1.0
1,209,782	+				+0.2
1,209,783	-				+1.7
1,209,856	+				-1.3
1,209,950	+		QEN71_RS05470	0.15	+1.1
1,209,950	+		QEN71_RS05470	0.15	+1.3
1,209,953	+		QEN71_RS05470	0.15	-0.5
1,209,954	-		QEN71_RS05470	0.16	-0.4
1,209,968	+		QEN71_RS05470	0.18	+0.4
1,209,968	+		QEN71_RS05470	0.18	-1.0
1,209,968	+		QEN71_RS05470	0.18	+0.6
1,209,971	+		QEN71_RS05470	0.19	-0.4
1,209,971	+		QEN71_RS05470	0.19	-0.4
1,209,972	-		QEN71_RS05470	0.19	+0.4
1,209,992	+		QEN71_RS05470	0.22	+0.8
1,210,019	+		QEN71_RS05470	0.27	-0.2
1,210,019	+		QEN71_RS05470	0.27	+0.6
1,210,022	+		QEN71_RS05470	0.27	-0.3
1,210,023	-		QEN71_RS05470	0.27	+0.0
1,210,028	+		QEN71_RS05470	0.28	+0.3
1,210,029	-		QEN71_RS05470	0.28	-1.4
1,210,103	+		QEN71_RS05470	0.41	+0.5
1,210,104	-		QEN71_RS05470	0.41	+0.4
1,210,104	-		QEN71_RS05470	0.41	+0.8
1,210,104	-		QEN71_RS05470	0.41	-1.0
1,210,106	+		QEN71_RS05470	0.41	-1.3
1,210,107	-		QEN71_RS05470	0.42	-1.3
1,210,107	-		QEN71_RS05470	0.42	+0.6
1,210,107	-		QEN71_RS05470	0.42	-0.4
1,210,107	-		QEN71_RS05470	0.42	+0.0
1,210,118	+		QEN71_RS05470	0.44	+0.2
1,210,118	+		QEN71_RS05470	0.44	+1.1
1,210,118	+		QEN71_RS05470	0.44	-0.3
1,210,118	+		QEN71_RS05470	0.44	+0.7
1,210,119	-		QEN71_RS05470	0.44	-0.2
1,210,119	-		QEN71_RS05470	0.44	+0.2
1,210,124	+		QEN71_RS05470	0.45	+0.2
1,210,124	+		QEN71_RS05470	0.45	+0.7
1,210,145	+		QEN71_RS05470	0.48	-0.1
1,210,145	+		QEN71_RS05470	0.48	-0.4
1,210,146	-		QEN71_RS05470	0.48	-0.3
1,210,146	-		QEN71_RS05470	0.48	-0.1
1,210,148	+		QEN71_RS05470	0.49	+0.8
1,210,148	+		QEN71_RS05470	0.49	-1.1
1,210,148	+		QEN71_RS05470	0.49	-0.0
1,210,149	-		QEN71_RS05470	0.49	+0.4
1,210,149	-		QEN71_RS05470	0.49	+0.1
1,210,163	+		QEN71_RS05470	0.51	-0.5
1,210,163	+		QEN71_RS05470	0.51	-0.3
1,210,164	-		QEN71_RS05470	0.51	-2.2
1,210,164	-		QEN71_RS05470	0.51	+0.7
1,210,239	-		QEN71_RS05470	0.64	+0.2
1,210,239	-		QEN71_RS05470	0.64	+0.7
1,210,320	-		QEN71_RS05470	0.78	-0.2
1,210,331	+		QEN71_RS05470	0.80	+1.0
1,210,332	-		QEN71_RS05470	0.80	+0.6
1,210,332	-		QEN71_RS05470	0.80	-0.2
1,210,332	-		QEN71_RS05470	0.80	-0.4
1,210,346	+		QEN71_RS05470	0.82	-0.3
1,210,346	+		QEN71_RS05470	0.82	+0.4
1,210,347	-		QEN71_RS05470	0.82	-2.2
1,210,347	-		QEN71_RS05470	0.82	-0.4
1,210,347	-		QEN71_RS05470	0.82	-1.0
1,210,349	+		QEN71_RS05470	0.83	-0.3
1,210,349	+		QEN71_RS05470	0.83	+0.7
1,210,349	+		QEN71_RS05470	0.83	-4.3
1,210,349	+		QEN71_RS05470	0.83	-0.1
1,210,356	-		QEN71_RS05470	0.84	+1.3
1,210,365	-		QEN71_RS05470	0.86	+0.1
1,210,365	-		QEN71_RS05470	0.86	+0.1
1,210,365	-		QEN71_RS05470	0.86	-0.5
1,210,365	-		QEN71_RS05470	0.86	+0.4
1,210,367	+		QEN71_RS05470	0.86	+0.4
1,210,367	+		QEN71_RS05470	0.86	-0.5
1,210,367	+		QEN71_RS05470	0.86	+1.0
1,210,367	+		QEN71_RS05470	0.86	-0.6
1,210,367	+		QEN71_RS05470	0.86	+0.2
1,210,367	+		QEN71_RS05470	0.86	-0.4
1,210,367	+		QEN71_RS05470	0.86	-0.3
1,210,368	-		QEN71_RS05470	0.86	-0.5
1,210,368	-		QEN71_RS05470	0.86	+2.3
1,210,368	-		QEN71_RS05470	0.86	-0.2
1,210,368	-		QEN71_RS05470	0.86	-0.2
1,210,370	+		QEN71_RS05470	0.86	-0.6
1,210,370	+		QEN71_RS05470	0.86	+0.3
1,210,371	-		QEN71_RS05470	0.87	-0.4
1,210,371	-		QEN71_RS05470	0.87	+0.3
1,210,371	-		QEN71_RS05470	0.87	+2.6
1,210,371	-		QEN71_RS05470	0.87	-0.1
1,210,371	-		QEN71_RS05470	0.87	+0.8
1,210,372	-		QEN71_RS05470	0.87	-0.1
1,210,496	+				+0.3
1,210,496	+				+0.2
1,210,496	+				-1.6
1,210,496	+				+0.2
1,210,497	-				+0.6
1,210,497	-				-0.7
1,210,497	-				+1.3
1,210,497	-				+1.2
1,210,497	-				-0.4
1,210,497	-				+0.2
1,210,501	+				-0.1
1,210,501	+				-0.4
1,210,501	+				-0.6
1,210,501	+				+0.2
1,210,501	+				-1.4
1,210,501	+				-0.9
1,210,501	+				+0.4
1,210,502	-				-0.3
1,210,502	-				-0.1
1,210,502	-				+0.0
1,210,502	-				-0.3
1,210,502	-				-0.4
1,210,502	-				-1.0
1,210,502	-				+0.2
1,210,510	+				-0.1
1,210,510	+				+0.1
1,210,510	+				+0.9
1,210,511	-				-0.1
1,210,511	-				-0.4
1,210,511	-				+0.3
1,210,511	-				+0.2
1,210,511	-				+0.4
1,210,537	+				-0.3
1,210,537	+				-0.4
1,210,537	+				+1.0
1,210,537	+				+0.5
1,210,538	-				-0.0
1,210,538	-				+1.4
1,210,538	-				-0.9
1,210,538	-				-0.3
1,210,538	-				-0.6
1,210,545	+				-0.2
1,210,553	+				+0.3
1,210,554	-				-0.3
1,210,554	-				-0.0
1,210,690	+				+0.5
1,210,690	+				+0.3
1,210,691	-				-1.1
1,210,691	-				-0.6
1,210,781	+				+0.5
1,210,781	+				-1.1
1,210,781	+				+0.3
1,210,782	-				+1.6
1,210,806	+				-1.4
1,210,806	+				-0.6
1,210,806	+				+0.6
1,210,806	+				+0.4
1,210,806	+				-1.6
1,210,806	+				-0.1
1,210,807	-				+1.3
1,210,807	-				-1.8
1,210,807	-				-0.6
1,210,807	-				+0.4
1,211,031	+				-1.1
1,211,031	+				+0.2
1,211,031	+				+0.7
1,211,032	-				+0.4
1,211,039	+				+0.4
1,211,040	-				-0.8
1,211,086	+				-1.9
1,211,111	+				-1.1
1,211,111	+				+1.0
1,211,111	+				-0.5
1,211,112	-				-1.1
1,211,112	-				-1.0
1,211,138	+				-0.3
1,211,139	-				+0.9
1,211,139	-				+0.1
1,211,139	-				-2.4
1,211,142	-				-0.3
1,211,166	+				+1.3
1,211,166	+				+0.1
1,211,166	+				-0.2
1,211,166	+				-0.6
1,211,167	-				+1.1
1,211,182	+				+0.6
1,211,316	+				+0.4
1,211,316	+				-0.8
1,211,316	+				-0.3
1,211,316	+				+0.4
1,211,316	+				-0.4
1,211,317	-				+0.5
1,211,317	-				-0.7
1,211,317	-				+0.3
1,211,317	-				+0.0
1,211,317	-				+0.0
1,211,317	-				+0.4
1,211,317	-				-0.4
1,211,317	-				+1.3
1,211,317	-				-0.5
1,211,317	-				-0.1
1,211,317	-				+0.1
1,211,317	-				+0.0
1,211,409	+				-0.4
1,211,409	+				-1.2
1,211,410	-				+0.0