Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS05235

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
1,151,335	+				-0.1
1,151,420	-		QEN71_RS05230	0.16	+1.0
1,151,502	-		QEN71_RS05230	0.27	+1.1
1,151,502	-		QEN71_RS05230	0.27	-0.2
1,151,548	+		QEN71_RS05230	0.33	-0.4
1,151,627	+		QEN71_RS05230	0.43	+0.1
1,151,627	+		QEN71_RS05230	0.43	-0.4
1,151,627	+		QEN71_RS05230	0.43	-0.6
1,151,627	+		QEN71_RS05230	0.43	-1.0
1,151,627	+		QEN71_RS05230	0.43	-2.4
1,151,627	+		QEN71_RS05230	0.43	-2.3
1,151,627	+		QEN71_RS05230	0.43	-0.4
1,151,628	-		QEN71_RS05230	0.43	-1.1
1,151,628	-		QEN71_RS05230	0.43	+0.5
1,151,628	-		QEN71_RS05230	0.43	+0.2
1,151,628	-		QEN71_RS05230	0.43	-0.2
1,151,628	-		QEN71_RS05230	0.43	+0.3
1,151,628	-		QEN71_RS05230	0.43	+1.2
1,151,628	-		QEN71_RS05230	0.43	-1.4
1,151,628	-		QEN71_RS05230	0.43	-0.7
1,151,628	-		QEN71_RS05230	0.43	+1.2
1,151,737	+		QEN71_RS05230	0.57	+0.1
1,151,738	-		QEN71_RS05230	0.57	+0.0
1,151,784	-		QEN71_RS05230	0.63	+1.3
1,151,784	-		QEN71_RS05230	0.63	-0.3
1,151,879	+		QEN71_RS05230	0.75	+0.2
1,151,879	+		QEN71_RS05230	0.75	+1.7
1,151,880	-		QEN71_RS05230	0.75	-1.4
1,151,880	-		QEN71_RS05230	0.75	+0.3
1,151,880	-		QEN71_RS05230	0.75	-0.4
1,151,880	-		QEN71_RS05230	0.75	+0.6
1,151,881	+		QEN71_RS05230	0.76	-0.2
1,151,881	+		QEN71_RS05230	0.76	+0.5
1,151,881	+		QEN71_RS05230	0.76	+0.4
1,151,881	+		QEN71_RS05230	0.76	-0.5
1,152,069	-				+1.0
1,152,069	-				+0.7
1,152,174	+				-1.1
1,152,174	+				+0.0
1,152,174	+				-0.9
1,152,174	+				-0.6
1,152,174	+				-0.1
1,152,174	+				+0.0
1,152,174	+				+0.1
1,152,174	+				-0.0
1,152,174	+				+0.2
1,152,175	-				-0.7
1,152,175	-				-1.8
1,152,175	-				+0.3
1,152,175	-				-0.1
1,152,175	-				-0.6
1,152,175	-				+1.0
1,152,175	-				+0.7
1,152,279	+				+0.3
1,152,279	+				+0.3
1,152,279	+				+1.7
1,152,279	+				-0.1
1,152,279	+				-2.8
1,152,279	+				-0.6
1,152,279	+				-0.0
1,152,279	+				-1.3
1,152,279	+				+0.1
1,152,279	+				+1.2
1,152,280	-				-1.0
1,152,280	-				+0.6
1,152,280	-				+0.1
1,152,280	-				-0.8
1,152,280	-				-2.4
1,152,357	+		QEN71_RS05235	0.20	-0.2
1,152,357	+		QEN71_RS05235	0.20	-0.1
1,152,357	+		QEN71_RS05235	0.20	+0.7
1,152,357	+		QEN71_RS05235	0.20	-0.2
1,152,358	-		QEN71_RS05235	0.21	-1.8
1,152,358	-		QEN71_RS05235	0.21	-2.7
1,152,358	-		QEN71_RS05235	0.21	-0.9
1,152,366	+		QEN71_RS05235	0.22	+0.1
1,152,367	-		QEN71_RS05235	0.23	-0.6
1,152,367	-		QEN71_RS05235	0.23	-0.2
1,152,484	-		QEN71_RS05235	0.50	+0.2
1,152,506	+		QEN71_RS05235	0.55	-0.5
1,152,506	+		QEN71_RS05235	0.55	-0.0
1,152,506	+		QEN71_RS05235	0.55	+0.1
1,152,507	-		QEN71_RS05235	0.55	-0.4
1,152,556	+		QEN71_RS05235	0.67	-0.9
1,152,557	-		QEN71_RS05235	0.67	+0.7
1,152,557	-		QEN71_RS05235	0.67	-0.8
1,152,585	+		QEN71_RS05235	0.73	-0.1
1,152,585	+		QEN71_RS05235	0.73	+2.7
1,152,585	+		QEN71_RS05235	0.73	-1.4
1,152,586	-		QEN71_RS05235	0.74	-0.1
1,152,586	-		QEN71_RS05235	0.74	-0.8
1,152,586	-		QEN71_RS05235	0.74	-0.4
1,152,622	-		QEN71_RS05235	0.82	+0.8
1,152,821	+				+0.3
1,152,821	+				+0.1
1,152,822	-				-0.2
1,152,822	-				-0.1
1,152,845	+		QEN71_RS05240	0.13	-0.3
1,152,845	+		QEN71_RS05240	0.13	-1.0
1,152,845	+		QEN71_RS05240	0.13	-1.4
1,152,846	-		QEN71_RS05240	0.14	-0.2
1,153,094	+		QEN71_RS05240	0.59	+0.4
1,153,094	+		QEN71_RS05240	0.59	-0.1
1,153,094	+		QEN71_RS05240	0.59	+0.3
1,153,094	+		QEN71_RS05240	0.59	-0.7
1,153,094	+		QEN71_RS05240	0.59	-0.8
1,153,094	+		QEN71_RS05240	0.59	+0.1
1,153,094	+		QEN71_RS05240	0.59	-1.6
1,153,094	+		QEN71_RS05240	0.59	-1.1
1,153,094	+		QEN71_RS05240	0.59	-0.8
1,153,094	+		QEN71_RS05240	0.59	+0.7
1,153,095	-		QEN71_RS05240	0.59	-1.1
1,153,095	-		QEN71_RS05240	0.59	-0.3
1,153,095	-		QEN71_RS05240	0.59	+1.2
1,153,095	-		QEN71_RS05240	0.59	+0.3
1,153,163	+		QEN71_RS05240	0.72	+1.3
1,153,163	+		QEN71_RS05240	0.72	-1.1
1,153,164	-		QEN71_RS05240	0.72	+1.0
1,153,164	-		QEN71_RS05240	0.72	+0.9
1,153,301	+				+1.6
1,153,301	+				-1.3
1,153,302	-				+0.3
1,153,339	+				+0.4
1,153,339	+				+0.7
1,153,345	+				+0.0
1,153,345	+				-0.3
1,153,345	+				-0.6
1,153,345	+				-1.8
1,153,345	+				+0.9
1,153,346	-				-0.1
1,153,346	-				-0.4
1,153,346	-				+0.9
1,153,349	+				+0.8
1,153,349	+				+0.1
1,153,349	+				-0.1
1,153,349	+				-0.8
1,153,350	-				-0.9
1,153,350	-				-0.6
1,153,350	-				-0.2
1,153,350	-				+0.5
1,153,350	-				-1.0
1,153,350	-				+0.1
1,153,350	-				-0.7
1,153,353	+				+1.4
1,153,353	+				-0.0
1,153,353	+				-0.4
1,153,353	+				+0.0
1,153,353	+				+1.6
1,153,353	+				+1.5
1,153,354	-				+0.0
1,153,354	-				-0.0
1,153,354	-				-0.6
1,153,354	-				-0.3
1,153,354	-				+0.9
1,153,363	+				+1.5
1,153,389	+				-0.9
1,153,389	+				-0.3
1,153,389	+				-1.1
1,153,389	+				-0.2
1,153,390	-				+0.4
1,153,496	+				-0.3
1,153,496	+				-0.3
1,153,496	+				-0.3
1,153,496	+				+0.3
1,153,496	+				-0.4
1,153,496	+				+0.0
1,153,496	+				+0.4
1,153,496	+				-0.7
1,153,496	+				+0.8
1,153,496	+				+0.4
1,153,496	+				-0.5
1,153,497	-				+0.1
1,153,497	-				-0.4
1,153,497	-				+0.2
1,153,497	-				-1.4
1,153,497	-				+0.3
1,153,497	-				-0.0
1,153,536	+				+0.1
1,153,600	+				-1.6
1,153,600	+				-2.8
1,153,600	+				-1.4
1,153,600	+				-1.6
1,153,600	+				-0.5
1,153,600	+				-1.1
1,153,600	+				+0.6
1,153,600	+				-1.2
1,153,601	-				-0.7
1,153,601	-				-2.6
1,153,601	-				-2.6
1,153,601	-				-1.2
1,153,601	-				-1.0
1,153,601	-				-1.3
1,153,607	+				-1.1
1,153,607	+				-1.7
1,153,607	+				+0.4
1,153,608	-				-1.2
1,153,608	-				-1.8