Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS02795

Experiment: L-Rhamnose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntQEN71_RS02785 and QEN71_RS02790 are separated by 462 nucleotidesQEN71_RS02790 and QEN71_RS02795 are separated by 201 nucleotidesQEN71_RS02795 and QEN71_RS02800 are separated by 486 nucleotides QEN71_RS02785: QEN71_RS02785 - ornithine carbamoyltransferase, at 623,379 to 624,308 _RS02785 QEN71_RS02790: QEN71_RS02790 - DUF3579 domain-containing protein, at 624,771 to 625,106 _RS02790 QEN71_RS02795: QEN71_RS02795 - 30S ribosomal protein S20, at 625,308 to 625,586 _RS02795 QEN71_RS02800: QEN71_RS02800 - murein biosynthesis integral membrane protein MurJ, at 626,073 to 627,623 _RS02800 Position (kb) 625 626Strain fitness (log2 ratio) -3 -2 -1 0 1at 624.308 kb on + strandat 624.308 kb on + strandat 624.308 kb on + strandat 624.309 kb on - strandat 624.309 kb on - strandat 624.309 kb on - strandat 624.309 kb on - strandat 624.317 kb on + strandat 624.317 kb on + strandat 624.317 kb on + strandat 624.317 kb on + strandat 624.318 kb on - strandat 624.318 kb on - strandat 624.371 kb on - strandat 624.371 kb on - strandat 624.371 kb on - strandat 624.371 kb on - strandat 624.385 kb on + strandat 624.385 kb on + strandat 624.385 kb on + strandat 624.385 kb on + strandat 624.385 kb on + strandat 624.385 kb on + strandat 624.386 kb on - strandat 624.499 kb on + strandat 624.500 kb on - strandat 624.500 kb on - strandat 624.501 kb on + strandat 624.540 kb on + strandat 624.540 kb on + strandat 624.540 kb on + strandat 624.540 kb on + strandat 624.540 kb on + strandat 624.584 kb on + strandat 624.584 kb on + strandat 624.584 kb on + strandat 624.584 kb on + strandat 624.584 kb on + strandat 624.659 kb on + strandat 624.659 kb on + strandat 624.659 kb on + strandat 624.659 kb on + strandat 624.659 kb on + strandat 624.715 kb on + strandat 625.310 kb on - strandat 626.058 kb on + strandat 626.058 kb on + strandat 626.058 kb on + strandat 626.058 kb on + strandat 626.058 kb on + strandat 626.058 kb on + strandat 626.059 kb on - strandat 626.059 kb on - strandat 626.059 kb on - strandat 626.059 kb on - strandat 626.059 kb on - strandat 626.060 kb on + strandat 626.060 kb on + strandat 626.060 kb on + strandat 626.060 kb on + strandat 626.060 kb on + strandat 626.060 kb on + strandat 626.060 kb on + strandat 626.060 kb on + strandat 626.063 kb on + strandat 626.063 kb on + strandat 626.063 kb on + strandat 626.063 kb on + strandat 626.063 kb on + strandat 626.063 kb on + strandat 626.063 kb on + strandat 626.063 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Rhamnose (C)
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624,308 + -0.7
624,308 + -3.4
624,308 + -2.2
624,309 - -0.3
624,309 - +0.7
624,309 - -0.5
624,309 - -0.6
624,317 + -3.0
624,317 + -1.1
624,317 + -0.5
624,317 + -1.5
624,318 - -0.6
624,318 - -1.2
624,371 - +0.6
624,371 - +0.2
624,371 - +0.0
624,371 - +0.0
624,385 + -0.4
624,385 + -1.1
624,385 + -1.7
624,385 + -1.9
624,385 + -1.8
624,385 + -0.5
624,386 - -0.1
624,499 + -0.5
624,500 - +1.0
624,500 - +1.5
624,501 + +1.0
624,540 + -1.5
624,540 + -0.5
624,540 + +1.0
624,540 + -1.4
624,540 + +0.1
624,584 + -0.5
624,584 + +0.1
624,584 + +0.5
624,584 + +1.1
624,584 + -0.2
624,659 + +1.2
624,659 + -0.8
624,659 + +0.6
624,659 + -1.0
624,659 + +0.7
624,715 + +0.8
625,310 - -0.5
626,058 + +0.1
626,058 + -1.5
626,058 + -1.4
626,058 + +0.5
626,058 + -0.8
626,058 + -0.2
626,059 - +0.5
626,059 - -0.9
626,059 - +1.0
626,059 - -0.8
626,059 - -0.1
626,060 + +0.1
626,060 + +0.2
626,060 + +0.2
626,060 + +0.6
626,060 + +0.5
626,060 + +0.7
626,060 + -1.8
626,060 + +1.7
626,063 + -1.8
626,063 + -2.8
626,063 + +0.7
626,063 + -0.3
626,063 + -0.5
626,063 + -0.5
626,063 + +0.0
626,063 + -0.8

Or see this region's nucleotide sequence