Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03953

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1
4,434,777	+		MIT1002_03951	0.83	+0.0
4,434,777	-		MIT1002_03951	0.83	+0.1
4,434,806	+		MIT1002_03951	0.88	-0.5
4,434,841	+				-1.0
4,434,922	-				+0.6
4,434,939	-				-0.4
4,435,083	+		MIT1002_03952	0.27	-1.0
4,435,083	+		MIT1002_03952	0.27	+0.4
4,435,083	+		MIT1002_03952	0.27	-0.1
4,435,083	+		MIT1002_03952	0.27	+1.5
4,435,086	-		MIT1002_03952	0.27	-0.6
4,435,091	-		MIT1002_03952	0.28	+0.6
4,435,162	-		MIT1002_03952	0.37	+0.1
4,435,187	+		MIT1002_03952	0.40	-0.8
4,435,197	+		MIT1002_03952	0.42	+0.7
4,435,221	+		MIT1002_03952	0.45	-0.8
4,435,362	+		MIT1002_03952	0.63	+0.9
4,435,387	+		MIT1002_03952	0.67	+0.1
4,435,387	+		MIT1002_03952	0.67	+1.0
4,435,387	+		MIT1002_03952	0.67	+0.3
4,435,395	-		MIT1002_03952	0.68	-1.3
4,435,395	-		MIT1002_03952	0.68	+0.2
4,435,395	-		MIT1002_03952	0.68	-1.5
4,435,429	-		MIT1002_03952	0.72	-0.1
4,435,429	-		MIT1002_03952	0.72	+0.9
4,435,429	-		MIT1002_03952	0.72	-0.1
4,435,431	+		MIT1002_03952	0.72	+0.5
4,435,639	-				-0.5
4,435,723	-				+0.3
4,435,726	+				+0.4
4,435,734	-		MIT1002_03953	0.10	+1.0
4,435,792	+		MIT1002_03953	0.18	+0.5
4,435,792	+		MIT1002_03953	0.18	-0.0
4,435,792	+		MIT1002_03953	0.18	+0.2
4,435,836	-		MIT1002_03953	0.23	-1.3
4,435,892	+		MIT1002_03953	0.30	+0.8
4,435,900	-		MIT1002_03953	0.31	+1.9
4,435,918	+		MIT1002_03953	0.34	+0.5
4,436,160	-		MIT1002_03953	0.64	+0.3
4,436,165	-		MIT1002_03953	0.65	+0.9
4,436,195	-		MIT1002_03953	0.69	+0.8
4,436,195	-		MIT1002_03953	0.69	+1.1
4,436,195	-		MIT1002_03953	0.69	+0.1
4,436,239	-		MIT1002_03953	0.74	+0.0
4,436,300	+		MIT1002_03953	0.82	-2.1
4,436,300	+		MIT1002_03953	0.82	+1.1
4,436,308	-		MIT1002_03953	0.83	+0.6
4,436,310	+		MIT1002_03953	0.83	-0.4
4,436,412	-				+0.5
4,436,412	-				-1.5
4,436,422	-				+0.8
4,436,422	-				-0.8
4,436,431	+				-1.2
4,436,431	+				+0.2
4,436,448	+				+0.1
4,436,449	-				-0.5
4,436,503	+				-0.1
4,436,511	-				-0.1
4,436,511	-				-1.4
4,436,511	-				+0.5
4,436,513	-				-0.7
4,436,549	+				+0.7
4,436,591	-				+0.4
4,436,611	+				-0.1
4,436,680	-				+0.9
4,436,792	+				+1.1
4,436,792	+				-1.1
4,436,799	-				-0.3
4,436,799	-				-1.3
4,436,813	-				+0.0
4,436,813	-				-0.9
4,436,837	+				+0.1
4,436,837	+				+0.3
4,436,850	+				-2.8
4,436,967	+		MIT1002_03954	0.11	+0.2
4,436,975	-		MIT1002_03954	0.12	+1.7
4,436,979	-		MIT1002_03954	0.12	-3.1
4,437,090	-		MIT1002_03954	0.19	-0.8
4,437,107	+		MIT1002_03954	0.20	+0.1
4,437,112	+		MIT1002_03954	0.20	+0.3
4,437,115	-		MIT1002_03954	0.21	-0.3
4,437,162	-		MIT1002_03954	0.23	-0.1
4,437,282	+		MIT1002_03954	0.31	+0.6
4,437,282	+		MIT1002_03954	0.31	+0.5
4,437,290	-		MIT1002_03954	0.31	-0.8
4,437,299	-		MIT1002_03954	0.32	+0.2
4,437,318	+		MIT1002_03954	0.33	+0.9
4,437,366	+		MIT1002_03954	0.36	+0.3
4,437,374	-		MIT1002_03954	0.37	+0.9
4,437,374	-		MIT1002_03954	0.37	-0.2
4,437,393	-		MIT1002_03954	0.38	-0.3