Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03742

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1
4,182,463	-		MIT1002_03742	0.18	-1.1
4,182,464	-		MIT1002_03742	0.19	-0.5
4,182,480	-		MIT1002_03742	0.40	-1.1
4,182,529	-				-0.5
4,182,529	-				+0.3
4,182,616	+				-0.4
4,182,687	-				+0.2
4,182,727	+				+1.5
4,182,727	+				+1.6
4,182,727	+				-0.3
4,182,727	+				+0.6
4,182,727	+				-2.0
4,182,727	+				+0.4
4,182,735	-				+1.9
4,182,735	-				+0.8
4,182,735	-				+0.3
4,182,735	-				-0.5
4,182,735	-				-0.3
4,182,735	-				-1.3
4,182,775	+				+0.3
4,182,782	+				+0.1
4,182,790	+				-0.3
4,182,796	+				+1.5
4,182,865	+				+0.7
4,182,902	-		MIT1002_03743	0.11	+0.8
4,182,902	-		MIT1002_03743	0.11	+0.8
4,182,931	+		MIT1002_03743	0.13	-0.4
4,182,934	-		MIT1002_03743	0.13	+0.1
4,182,945	-		MIT1002_03743	0.14	+0.2
4,182,981	+		MIT1002_03743	0.16	-0.9
4,182,994	+		MIT1002_03743	0.16	+0.2
4,183,006	-		MIT1002_03743	0.17	+0.5
4,183,009	+		MIT1002_03743	0.17	-2.0
4,183,024	-		MIT1002_03743	0.18	-2.1
4,183,024	-		MIT1002_03743	0.18	+0.9
4,183,066	+		MIT1002_03743	0.20	-0.3
4,183,076	+		MIT1002_03743	0.21	-0.6
4,183,082	+		MIT1002_03743	0.21	+0.7
4,183,082	+		MIT1002_03743	0.21	+0.9
4,183,090	-		MIT1002_03743	0.22	-0.1
4,183,090	-		MIT1002_03743	0.22	+0.4
4,183,117	-		MIT1002_03743	0.23	-0.5
4,183,119	+		MIT1002_03743	0.23	-0.1
4,183,127	-		MIT1002_03743	0.24	+2.1
4,183,278	+		MIT1002_03743	0.32	-0.0
4,183,331	+		MIT1002_03743	0.35	+0.4
4,183,339	-		MIT1002_03743	0.35	+0.5
4,183,405	+		MIT1002_03743	0.39	+1.5
4,183,469	+		MIT1002_03743	0.42	+0.5
4,183,470	-		MIT1002_03743	0.42	+1.4
4,183,482	+		MIT1002_03743	0.43	-0.3
4,183,491	-		MIT1002_03743	0.43	+1.0
4,183,491	-		MIT1002_03743	0.43	-0.9
4,183,504	+		MIT1002_03743	0.44	+0.4
4,183,510	-		MIT1002_03743	0.44	-0.4
4,183,524	+		MIT1002_03743	0.45	+1.3