Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03192

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1
3,554,448	-		MIT1002_03190	0.22	-1.8
3,554,464	-		MIT1002_03190	0.23	+0.8
3,554,464	-		MIT1002_03190	0.23	-0.8
3,554,497	+		MIT1002_03190	0.28	+0.5
3,554,507	+		MIT1002_03190	0.29	-0.4
3,554,524	-		MIT1002_03190	0.31	+0.3
3,554,529	-		MIT1002_03190	0.31	-1.8
3,554,535	+		MIT1002_03190	0.32	-3.2
3,554,545	+		MIT1002_03190	0.33	-0.2
3,554,545	-		MIT1002_03190	0.33	+0.4
3,554,589	+		MIT1002_03190	0.39	+0.0
3,554,597	-		MIT1002_03190	0.40	-0.1
3,554,597	-		MIT1002_03190	0.40	+1.0
3,554,619	+		MIT1002_03190	0.43	+0.6
3,554,619	+		MIT1002_03190	0.43	-0.8
3,554,627	-		MIT1002_03190	0.44	-0.6
3,554,627	-		MIT1002_03190	0.44	-1.1
3,554,627	-		MIT1002_03190	0.44	+0.1
3,554,710	+		MIT1002_03190	0.54	+0.0
3,554,710	+		MIT1002_03190	0.54	-1.0
3,554,711	+		MIT1002_03190	0.54	-3.0
3,554,728	-		MIT1002_03190	0.56	+1.6
3,554,744	+		MIT1002_03190	0.58	-1.9
3,554,744	+		MIT1002_03190	0.58	+0.5
3,554,823	+		MIT1002_03190	0.68	+0.5
3,554,899	+		MIT1002_03190	0.77	-0.4
3,554,945	-		MIT1002_03190	0.83	-0.1
3,554,994	-		MIT1002_03190	0.89	+0.6
3,555,086	+				+0.7
3,555,088	-				-0.3
3,555,088	-				-1.1
3,555,094	-				-1.1
3,555,094	-				-4.0
3,555,162	+				-0.2
3,555,201	+		MIT1002_03191	0.29	+0.3
3,555,219	+		MIT1002_03191	0.37	-0.3
3,555,240	-		MIT1002_03191	0.47	-1.8
3,555,255	+		MIT1002_03191	0.55	-0.4
3,555,255	+		MIT1002_03191	0.55	+1.0
3,555,255	+		MIT1002_03191	0.55	+1.4
3,555,263	-		MIT1002_03191	0.58	-0.1
3,555,263	-		MIT1002_03191	0.58	+0.2
3,555,273	-		MIT1002_03191	0.63	-0.8
3,555,288	+		MIT1002_03191	0.71	-0.7
3,555,434	-				-1.4
3,555,463	+				+0.3
3,555,522	-		MIT1002_03192	0.12	-0.2
3,555,524	+		MIT1002_03192	0.12	-0.3
3,555,524	+		MIT1002_03192	0.12	-0.2
3,555,526	+		MIT1002_03192	0.12	+2.1
3,555,532	-		MIT1002_03192	0.13	+0.3
3,555,534	-		MIT1002_03192	0.13	-0.4
3,555,534	-		MIT1002_03192	0.13	-0.1
3,555,663	+		MIT1002_03192	0.29	+0.3
3,555,684	+		MIT1002_03192	0.31	-0.1
3,555,718	+		MIT1002_03192	0.35	-2.7
3,555,906	-		MIT1002_03192	0.57	-1.0
3,555,912	+		MIT1002_03192	0.58	+0.8
3,555,917	+		MIT1002_03192	0.59	-0.2
3,555,917	+		MIT1002_03192	0.59	-0.4
3,555,927	-		MIT1002_03192	0.60	+0.1
3,555,996	-		MIT1002_03192	0.68	-1.0
3,556,035	+		MIT1002_03192	0.72	-0.7
3,556,080	+		MIT1002_03192	0.78	-1.7
3,556,109	-		MIT1002_03192	0.81	+0.4
3,556,132	-		MIT1002_03192	0.84	-0.0
3,556,154	-		MIT1002_03192	0.86	+0.1
3,556,154	-		MIT1002_03192	0.86	-1.7
3,556,170	-		MIT1002_03192	0.88	+0.4
3,556,170	-		MIT1002_03192	0.88	-2.1
3,556,173	+		MIT1002_03192	0.89	+0.3
3,556,459	+				-0.2
3,556,467	-				-0.0
3,556,636	+		MIT1002_03193	0.14	-1.6
3,556,679	+		MIT1002_03193	0.17	+0.9
3,556,679	-		MIT1002_03193	0.17	+0.4
3,556,710	+		MIT1002_03193	0.20	+0.2
3,556,717	+		MIT1002_03193	0.20	+0.0
3,556,727	+		MIT1002_03193	0.21	-1.1
3,556,732	+		MIT1002_03193	0.21	+0.6
3,556,748	+		MIT1002_03193	0.23	-0.8
3,556,777	+		MIT1002_03193	0.25	+0.9
3,556,777	+		MIT1002_03193	0.25	-1.3
3,556,785	-		MIT1002_03193	0.26	-2.0
3,556,785	-		MIT1002_03193	0.26	+1.0
3,556,916	-		MIT1002_03193	0.36	-1.1
3,556,970	-		MIT1002_03193	0.40	-0.8
3,556,975	-		MIT1002_03193	0.40	-0.2
3,556,976	+		MIT1002_03193	0.40	-0.4
3,556,981	+		MIT1002_03193	0.41	-1.8
3,556,991	+		MIT1002_03193	0.42	-2.0
3,557,018	+		MIT1002_03193	0.44	+1.3
3,557,018	+		MIT1002_03193	0.44	+0.1
3,557,026	-		MIT1002_03193	0.44	+0.4
3,557,041	+		MIT1002_03193	0.46	-0.9
3,557,047	-		MIT1002_03193	0.46	-0.2
3,557,132	-		MIT1002_03193	0.53	-2.1
3,557,133	-		MIT1002_03193	0.53	+1.1
3,557,203	-		MIT1002_03193	0.58	+0.9