Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03121

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1
3,474,280	+		MIT1002_03119	0.85	-0.2
3,474,288	-		MIT1002_03119	0.85	+0.7
3,474,366	-				+0.7
3,474,385	-				-0.6
3,474,401	-				+0.4
3,474,404	-				-0.4
3,474,414	+				-1.3
3,474,423	-				+1.1
3,474,491	-				-1.4
3,474,557	+				+0.4
3,474,560	+				-0.3
3,474,591	+				-0.8
3,474,633	-				-0.2
3,474,782	+		MIT1002_03120	0.28	-0.6
3,474,782	+		MIT1002_03120	0.28	+0.1
3,474,812	+		MIT1002_03120	0.33	-0.2
3,474,831	+		MIT1002_03120	0.36	+0.6
3,474,839	-		MIT1002_03120	0.38	+0.9
3,474,840	+		MIT1002_03120	0.38	+0.0
3,474,840	+		MIT1002_03120	0.38	-1.8
3,474,844	-		MIT1002_03120	0.39	+0.5
3,474,847	+		MIT1002_03120	0.39	-0.9
3,474,935	-		MIT1002_03120	0.54	-1.1
3,474,935	-		MIT1002_03120	0.54	-0.4
3,474,950	-		MIT1002_03120	0.56	-2.6
3,474,963	+		MIT1002_03120	0.58	+1.5
3,474,996	-		MIT1002_03120	0.64	-3.4
3,475,022	+		MIT1002_03120	0.68	-0.9
3,475,037	+		MIT1002_03120	0.71	+0.5
3,475,055	-		MIT1002_03120	0.74	+0.4
3,475,069	+		MIT1002_03120	0.76	+0.3
3,475,069	+		MIT1002_03120	0.76	-1.0
3,475,069	+		MIT1002_03120	0.76	+0.1
3,475,069	+		MIT1002_03120	0.76	-2.5
3,475,069	+		MIT1002_03120	0.76	-1.8
3,475,069	+		MIT1002_03120	0.76	-1.0
3,475,077	-		MIT1002_03120	0.78	-0.1
3,475,077	-		MIT1002_03120	0.78	+1.8
3,475,077	-		MIT1002_03120	0.78	-0.5
3,475,077	-		MIT1002_03120	0.78	+1.0
3,475,151	+				+0.9
3,475,159	-				+0.4
3,475,159	-				-0.1
3,475,159	-				+0.9
3,475,173	+				-1.2
3,475,173	+				+0.3
3,475,181	-				+0.7
3,475,204	-				+0.2
3,475,293	-		MIT1002_03121	0.16	-0.6
3,475,344	+		MIT1002_03121	0.32	-0.5
3,475,365	+		MIT1002_03121	0.38	+1.2
3,475,448	-		MIT1002_03121	0.63	-1.3
3,475,522	+		MIT1002_03121	0.86	+0.8
3,475,576	-				-1.3
3,475,617	-				+0.1
3,475,777	+		MIT1002_03122	0.16	+1.1
3,475,784	-		MIT1002_03122	0.17	+0.4
3,475,822	+		MIT1002_03122	0.20	+0.1
3,475,827	+		MIT1002_03122	0.20	+0.2
3,475,837	+		MIT1002_03122	0.21	-0.3
3,475,846	-		MIT1002_03122	0.22	-1.4
3,475,861	-		MIT1002_03122	0.23	-0.2
3,475,977	-		MIT1002_03122	0.33	-0.6
3,476,069	+		MIT1002_03122	0.41	-0.2
3,476,069	+		MIT1002_03122	0.41	+0.4
3,476,090	+		MIT1002_03122	0.42	-0.7
3,476,090	+		MIT1002_03122	0.42	+0.0
3,476,098	-		MIT1002_03122	0.43	+0.8
3,476,147	-		MIT1002_03122	0.47	+0.9
3,476,233	-		MIT1002_03122	0.54	-0.4
3,476,339	-		MIT1002_03122	0.63	-0.1
3,476,339	-		MIT1002_03122	0.63	-0.2
3,476,405	-		MIT1002_03122	0.69	+0.2
3,476,431	-		MIT1002_03122	0.71	+1.0
3,476,464	+		MIT1002_03122	0.74	-1.6
3,476,497	-		MIT1002_03122	0.77	-1.1
3,476,519	-		MIT1002_03122	0.78	+0.5