Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03084

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1
3,434,507	-				+0.1
3,434,516	+				-1.0
3,434,558	-				-0.7
3,434,604	-				-0.3
3,434,617	+				-2.7
3,434,625	-				-0.7
3,434,625	-				-0.8
3,434,715	-				-1.7
3,434,759	+				-0.0
3,434,767	-				-1.4
3,434,767	-				-1.7
3,434,767	-				+1.6
3,434,767	-				-0.4
3,434,767	-				-0.5
3,434,767	-				+0.3
3,434,767	-				+0.1
3,434,767	-				+0.6
3,434,835	+		MIT1002_03083	0.11	-0.2
3,434,851	+		MIT1002_03083	0.13	-0.5
3,434,917	-		MIT1002_03083	0.23	+1.6
3,434,981	+		MIT1002_03083	0.33	-0.8
3,434,989	+		MIT1002_03083	0.34	+1.0
3,434,997	-		MIT1002_03083	0.35	+0.1
3,435,026	+		MIT1002_03083	0.39	+1.3
3,435,026	+		MIT1002_03083	0.39	+1.0
3,435,026	+		MIT1002_03083	0.39	+0.1
3,435,033	+		MIT1002_03083	0.40	+0.8
3,435,034	-		MIT1002_03083	0.40	-0.1
3,435,034	-		MIT1002_03083	0.40	-0.4
3,435,041	-		MIT1002_03083	0.42	+1.1
3,435,041	-		MIT1002_03083	0.42	+0.5
3,435,043	+		MIT1002_03083	0.42	-2.2
3,435,046	-		MIT1002_03083	0.42	+0.0
3,435,051	-		MIT1002_03083	0.43	-0.4
3,435,058	-		MIT1002_03083	0.44	+0.2
3,435,058	-		MIT1002_03083	0.44	+1.0
3,435,068	-		MIT1002_03083	0.46	-0.2
3,435,071	+		MIT1002_03083	0.46	-0.4
3,435,102	-		MIT1002_03083	0.51	+0.1
3,435,140	+		MIT1002_03083	0.56	-0.1
3,435,502	+				-4.1
3,435,584	+		MIT1002_03084	0.12	-2.2
3,435,604	-		MIT1002_03084	0.13	-1.4
3,435,604	-		MIT1002_03084	0.13	-3.2
3,435,684	-		MIT1002_03084	0.20	-0.8
3,435,774	+		MIT1002_03084	0.27	-2.6
3,435,824	+		MIT1002_03084	0.30	-1.4
3,435,849	+		MIT1002_03084	0.32	-1.5
3,435,967	-		MIT1002_03084	0.42	-2.2
3,435,967	-		MIT1002_03084	0.42	-3.1
3,436,094	+		MIT1002_03084	0.51	-1.1
3,436,096	+		MIT1002_03084	0.52	-2.9
3,436,104	-		MIT1002_03084	0.52	-3.3
3,436,104	-		MIT1002_03084	0.52	-1.7
3,436,104	-		MIT1002_03084	0.52	-3.4
3,436,116	-		MIT1002_03084	0.53	-1.5
3,436,119	+		MIT1002_03084	0.53	-2.6
3,436,119	+		MIT1002_03084	0.53	-1.1
3,436,127	-		MIT1002_03084	0.54	-1.3
3,436,195	-		MIT1002_03084	0.59	+0.0
3,436,240	-		MIT1002_03084	0.63	-2.4
3,436,246	-		MIT1002_03084	0.63	-0.6
3,436,290	+		MIT1002_03084	0.67	-2.3
3,436,431	+		MIT1002_03084	0.78	-3.3
3,436,439	-		MIT1002_03084	0.78	-1.4
3,436,514	+		MIT1002_03084	0.84	-1.3
3,436,517	+		MIT1002_03084	0.84	-2.4
3,436,519	+		MIT1002_03084	0.85	-2.7
3,436,537	-		MIT1002_03084	0.86	-0.2
3,436,551	+		MIT1002_03084	0.87	-3.7
3,436,556	+		MIT1002_03084	0.87	-2.1
3,436,559	-		MIT1002_03084	0.88	-1.1
3,436,654	+				-1.8
3,436,657	+				-1.7
3,436,738	+				-2.8
3,436,746	-				-0.0
3,436,746	-				-1.2
3,436,748	-				-0.7
3,436,753	+				-1.5
3,436,761	-				-0.5
3,436,868	-				-0.6
3,436,873	+				-0.8
3,436,888	-				-2.2
3,436,901	-				-3.1
3,437,133	+		MIT1002_03085	0.30	-1.2
3,437,181	-		MIT1002_03085	0.35	-2.3
3,437,197	-		MIT1002_03085	0.37	-0.8
3,437,199	+		MIT1002_03085	0.37	-0.5
3,437,216	-		MIT1002_03085	0.39	-2.4
3,437,236	+		MIT1002_03085	0.41	-0.5
3,437,258	+		MIT1002_03085	0.43	-0.8
3,437,266	-		MIT1002_03085	0.44	+0.7
3,437,266	-		MIT1002_03085	0.44	-2.8
3,437,266	-		MIT1002_03085	0.44	-0.2
3,437,266	-		MIT1002_03085	0.44	-1.4
3,437,317	-		MIT1002_03085	0.49	-0.5
3,437,531	-		MIT1002_03085	0.72	-3.8
3,437,540	-		MIT1002_03085	0.73	-2.1
3,437,608	-		MIT1002_03085	0.80	-3.2
3,437,705	-				-1.2