Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02091

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1
2,353,020	-		MIT1002_02090	0.39	+1.6
2,353,130	+		MIT1002_02090	0.47	+1.0
2,353,154	-		MIT1002_02090	0.48	-0.0
2,353,154	-		MIT1002_02090	0.48	-0.9
2,353,299	+		MIT1002_02090	0.58	-1.8
2,353,300	+		MIT1002_02090	0.58	-0.6
2,353,312	-		MIT1002_02090	0.59	-0.2
2,353,406	+		MIT1002_02090	0.65	-1.2
2,353,413	+		MIT1002_02090	0.65	-0.2
2,353,514	-		MIT1002_02090	0.72	-0.4
2,353,545	-		MIT1002_02090	0.74	-0.1
2,353,706	+		MIT1002_02090	0.84	+0.3
2,353,714	-		MIT1002_02090	0.85	+0.7
2,353,714	-		MIT1002_02090	0.85	-0.2
2,353,714	-		MIT1002_02090	0.85	+0.5
2,353,728	-		MIT1002_02090	0.86	-0.3
2,353,794	+				-0.2
2,353,917	-				+0.8
2,353,987	-				-0.3
2,353,987	-				-1.2
2,354,029	+				-0.0
2,354,039	-		MIT1002_02091	0.11	+0.3
2,354,075	+		MIT1002_02091	0.21	+0.6
2,354,150	+		MIT1002_02091	0.41	-0.0
2,354,157	+		MIT1002_02091	0.43	-0.7
2,354,172	-		MIT1002_02091	0.47	-2.3
2,354,193	+		MIT1002_02091	0.53	+0.7
2,354,193	+		MIT1002_02091	0.53	-2.5
2,354,201	-		MIT1002_02091	0.56	-1.8
2,354,245	-		MIT1002_02091	0.68	+0.1
2,354,250	+		MIT1002_02091	0.69	-0.5
2,354,283	-		MIT1002_02091	0.78	-0.2
2,354,433	-				-1.2
2,354,444	-				-0.4
2,354,447	+				+0.9
2,354,454	-				+1.4
2,354,459	-				+0.8
2,354,488	+		MIT1002_02092	0.11	+0.3
2,354,529	+		MIT1002_02092	0.15	+0.2
2,354,536	-		MIT1002_02092	0.16	+0.2
2,354,541	-		MIT1002_02092	0.16	-0.5
2,354,619	-		MIT1002_02092	0.23	+0.3
2,354,619	-		MIT1002_02092	0.23	-1.6
2,354,659	+		MIT1002_02092	0.27	-2.4
2,354,762	+		MIT1002_02092	0.37	-1.0
2,354,762	-		MIT1002_02092	0.37	-0.2
2,354,781	-		MIT1002_02092	0.39	+0.6
2,354,796	+		MIT1002_02092	0.40	+1.3
2,354,812	+		MIT1002_02092	0.42	+0.6
2,354,886	-		MIT1002_02092	0.49	+1.1
2,354,975	+		MIT1002_02092	0.57	-0.3
2,354,983	-		MIT1002_02092	0.58	+0.3
2,355,018	+		MIT1002_02092	0.61	-0.1
2,355,069	-		MIT1002_02092	0.66	+1.0
2,355,084	+		MIT1002_02092	0.67	-0.0
2,355,084	+		MIT1002_02092	0.67	+0.6
2,355,137	+		MIT1002_02092	0.72	-3.9
2,355,236	+		MIT1002_02092	0.82	+0.3
2,355,290	-		MIT1002_02092	0.87	+0.2