Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01970

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1
2,203,782	-		MIT1002_01969	0.29	+0.0
2,203,796	+		MIT1002_01969	0.31	-1.0
2,203,850	-		MIT1002_01969	0.36	+0.2
2,203,884	+		MIT1002_01969	0.39	-0.5
2,203,895	+		MIT1002_01969	0.40	-1.5
2,203,912	+		MIT1002_01969	0.42	-1.0
2,203,914	+		MIT1002_01969	0.42	+0.2
2,203,924	+		MIT1002_01969	0.43	+2.9
2,203,924	+		MIT1002_01969	0.43	+0.9
2,203,924	+		MIT1002_01969	0.43	+0.5
2,204,091	+		MIT1002_01969	0.59	-0.9
2,204,147	-		MIT1002_01969	0.64	+0.2
2,204,189	+		MIT1002_01969	0.68	+0.0
2,204,196	+		MIT1002_01969	0.69	-0.6
2,204,204	-		MIT1002_01969	0.70	-0.3
2,204,234	+		MIT1002_01969	0.72	+0.2
2,204,242	-		MIT1002_01969	0.73	+0.1
2,204,280	-		MIT1002_01969	0.77	+0.7
2,204,309	+		MIT1002_01969	0.80	-0.2
2,204,410	+		MIT1002_01969	0.89	-0.3
2,204,516	-				-0.0
2,204,523	-				-0.7
2,204,799	+		MIT1002_01970	0.28	-0.2
2,204,868	+		MIT1002_01970	0.39	-0.3
2,204,879	+		MIT1002_01970	0.41	+0.9
2,205,028	-		MIT1002_01970	0.65	+0.5
2,205,028	-		MIT1002_01970	0.65	-0.1
2,205,052	-		MIT1002_01970	0.69	-1.1
2,205,059	-		MIT1002_01970	0.70	-2.1
2,205,085	+		MIT1002_01970	0.74	+0.3
2,205,208	-				-0.2
2,205,273	+				-0.4
2,205,457	-				+0.9
2,205,600	+		MIT1002_01971	0.51	-1.4
2,205,643	-		MIT1002_01971	0.63	+1.1
2,205,659	+		MIT1002_01971	0.68	+0.0
2,205,659	+		MIT1002_01971	0.68	-1.7
2,205,659	+		MIT1002_01971	0.68	-0.9
2,205,659	+		MIT1002_01971	0.68	-2.1
2,205,667	-		MIT1002_01971	0.70	+0.3
2,205,667	-		MIT1002_01971	0.70	-1.4
2,205,667	-		MIT1002_01971	0.70	-1.4
2,205,667	-		MIT1002_01971	0.70	-1.0
2,205,669	+		MIT1002_01971	0.71	+0.7
2,205,677	-		MIT1002_01971	0.73	+0.0
2,205,836	-				+0.6
2,206,045	+				-0.0
2,206,089	+		MIT1002_01972	0.11	+1.2
2,206,129	+		MIT1002_01972	0.17	-0.7
2,206,146	+		MIT1002_01972	0.19	-0.1
2,206,183	+		MIT1002_01972	0.24	-2.9