Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01564

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1
1,721,233	-		MIT1002_01563	0.49	+1.0
1,721,254	+		MIT1002_01563	0.50	+0.3
1,721,261	+		MIT1002_01563	0.50	+0.8
1,721,301	+		MIT1002_01563	0.52	+0.4
1,721,311	+		MIT1002_01563	0.53	+0.3
1,721,311	+		MIT1002_01563	0.53	+1.0
1,721,357	+		MIT1002_01563	0.55	+1.2
1,721,421	-		MIT1002_01563	0.59	+0.3
1,721,437	+		MIT1002_01563	0.60	-0.6
1,721,439	+		MIT1002_01563	0.60	-0.4
1,721,447	-		MIT1002_01563	0.60	-0.5
1,721,480	-		MIT1002_01563	0.62	-0.1
1,721,486	-		MIT1002_01563	0.62	-0.2
1,721,564	-		MIT1002_01563	0.66	+1.0
1,721,610	+		MIT1002_01563	0.68	-0.0
1,721,653	+		MIT1002_01563	0.71	+0.3
1,721,715	+		MIT1002_01563	0.74	+0.8
1,721,727	+		MIT1002_01563	0.75	-0.7
1,721,856	+		MIT1002_01563	0.81	+1.1
1,721,875	-		MIT1002_01563	0.82	-0.7
1,721,912	+		MIT1002_01563	0.84	+0.2
1,721,913	-		MIT1002_01563	0.84	-0.9
1,721,929	+		MIT1002_01563	0.85	+0.8
1,721,937	-		MIT1002_01563	0.85	-2.2
1,722,002	-		MIT1002_01563	0.89	+0.3
1,722,019	-		MIT1002_01563	0.90	-0.6
1,722,037	+				+0.2
1,722,100	+				+0.3
1,722,111	+				-0.9
1,722,126	+				+2.1
1,722,129	-				-0.5
1,722,129	-				+0.7
1,722,129	-				+1.0
1,722,129	-				-1.2
1,722,141	-				+0.9
1,722,216	+				-0.5
1,722,232	-				-1.6
1,722,232	-				+0.7
1,722,234	+				+1.5
1,722,234	+				-0.1
1,722,234	+				+0.7
1,722,234	+				-0.2
1,722,242	-				+0.8
1,722,242	-				-1.2
1,722,242	-				-0.2
1,722,242	-				+0.1
1,722,268	-				+0.1
1,722,310	+		MIT1002_01564	0.14	-1.0
1,722,329	+		MIT1002_01564	0.17	-1.8
1,722,332	-		MIT1002_01564	0.18	+0.5
1,722,360	+		MIT1002_01564	0.22	+0.8
1,722,393	-		MIT1002_01564	0.27	-0.2
1,722,396	+		MIT1002_01564	0.27	-0.8
1,722,429	+		MIT1002_01564	0.32	+1.1
1,722,429	+		MIT1002_01564	0.32	-0.1
1,722,442	+		MIT1002_01564	0.34	+0.6
1,722,457	+		MIT1002_01564	0.37	-0.9
1,722,561	-		MIT1002_01564	0.53	-0.4
1,722,596	+		MIT1002_01564	0.58	+0.0
1,722,779	+		MIT1002_01564	0.86	-0.5
1,722,779	+		MIT1002_01564	0.86	-0.9
1,722,862	-				+0.4
1,722,884	+				+0.6
1,722,905	+				-2.0
1,722,905	+				-0.1
1,722,939	-				+1.4
1,722,948	+				+0.0
1,722,949	-				+0.7
1,722,956	-				+0.2
1,722,956	-				-1.6
1,723,071	-				-0.0
1,723,147	+				+0.0
1,723,195	-				-0.3
1,723,239	+				-0.6
1,723,271	+				-2.6
1,723,279	-				-0.1
1,723,279	-				+0.8
1,723,279	-				-0.3
1,723,293	+				-0.0
1,723,335	-				+0.7
1,723,394	+		MIT1002_01565	0.15	-0.5
1,723,404	+		MIT1002_01565	0.17	+0.8
1,723,404	+		MIT1002_01565	0.17	-1.6
1,723,404	+		MIT1002_01565	0.17	-0.7
1,723,404	+		MIT1002_01565	0.17	-0.6
1,723,412	-		MIT1002_01565	0.18	-0.8
1,723,412	-		MIT1002_01565	0.18	-1.6
1,723,412	-		MIT1002_01565	0.18	-0.5
1,723,494	+		MIT1002_01565	0.32	-1.3
1,723,494	+		MIT1002_01565	0.32	+1.1
1,723,539	+		MIT1002_01565	0.39	-0.5
1,723,539	+		MIT1002_01565	0.39	-0.4
1,723,541	+		MIT1002_01565	0.40	+1.7
1,723,547	-		MIT1002_01565	0.41	-0.1
1,723,592	+		MIT1002_01565	0.48	+0.9
1,723,638	+		MIT1002_01565	0.56	-0.7
1,723,723	-		MIT1002_01565	0.71	+0.2
1,723,843	-				-1.0
1,723,845	+				+1.6
1,723,845	+				-0.1
1,723,853	-				-0.4