Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01464

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1
1,617,869	+		MIT1002_01463	0.48	-1.0
1,617,869	+		MIT1002_01463	0.48	-0.4
1,617,869	+		MIT1002_01463	0.48	-2.2
1,617,907	-		MIT1002_01463	0.50	+0.6
1,617,924	-		MIT1002_01463	0.51	+0.2
1,617,936	-		MIT1002_01463	0.51	+0.3
1,618,083	-		MIT1002_01463	0.59	+0.3
1,618,107	+		MIT1002_01463	0.60	+2.1
1,618,173	-		MIT1002_01463	0.64	+0.2
1,618,173	-		MIT1002_01463	0.64	+0.8
1,618,195	+		MIT1002_01463	0.65	-0.5
1,618,205	+		MIT1002_01463	0.65	-0.4
1,618,307	-		MIT1002_01463	0.71	+1.7
1,618,381	-		MIT1002_01463	0.75	-1.8
1,618,381	-		MIT1002_01463	0.75	-0.2
1,618,382	-		MIT1002_01463	0.75	+0.1
1,618,514	-		MIT1002_01463	0.82	-1.4
1,618,528	+		MIT1002_01463	0.82	-0.7
1,618,701	+				-0.2
1,618,772	+				+2.3
1,618,806	-				+1.5
1,618,840	-				-2.4
1,618,855	-				-0.3
1,618,855	-				+0.2
1,619,012	-		MIT1002_01464	0.22	-2.0
1,619,045	-		MIT1002_01464	0.27	+1.4
1,619,104	-		MIT1002_01464	0.35	-0.5
1,619,127	-		MIT1002_01464	0.39	-1.0
1,619,127	-		MIT1002_01464	0.39	-0.9
1,619,127	-		MIT1002_01464	0.39	-1.2
1,619,134	+		MIT1002_01464	0.40	-0.3
1,619,196	-		MIT1002_01464	0.49	-1.4
1,619,196	-		MIT1002_01464	0.49	-1.6
1,619,343	-		MIT1002_01464	0.70	+1.1
1,619,343	-		MIT1002_01464	0.70	-0.2
1,619,492	+				+2.4
1,619,560	+				+1.1
1,619,570	-				+0.4
1,619,576	+				+0.8
1,619,757	+				-2.2
1,619,812	+				+0.4
1,619,812	+				-0.3
1,619,820	-				+0.9
1,619,820	-				-0.2
1,619,820	-				-0.9
1,619,820	-				-0.3
1,619,832	+				+0.3
1,619,840	-				-0.0
1,619,916	+				+0.1