Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01194

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1
1,309,476	+				+0.5
1,309,477	-				-1.6
1,309,503	+				-1.6
1,309,590	-				-1.2
1,309,605	+				+0.8
1,309,661	-				-1.3
1,309,665	-				-0.1
1,309,692	+				-0.2
1,309,701	-				-0.3
1,309,701	-				-0.8
1,309,728	-				-0.5
1,309,825	+		MIT1002_01194	0.12	+0.8
1,309,850	+		MIT1002_01194	0.17	+0.8
1,309,857	+		MIT1002_01194	0.18	+0.7
1,309,858	-		MIT1002_01194	0.18	+0.8
1,309,858	-		MIT1002_01194	0.18	+0.2
1,309,858	-		MIT1002_01194	0.18	+1.5
1,309,858	-		MIT1002_01194	0.18	-0.3
1,309,873	-		MIT1002_01194	0.21	+0.8
1,309,937	+		MIT1002_01194	0.32	+0.3
1,309,947	-		MIT1002_01194	0.34	+0.9
1,310,004	-		MIT1002_01194	0.44	+0.1
1,310,012	+		MIT1002_01194	0.45	+0.2
1,310,012	+		MIT1002_01194	0.45	+1.7
1,310,012	+		MIT1002_01194	0.45	+0.3
1,310,012	+		MIT1002_01194	0.45	-0.9
1,310,012	+		MIT1002_01194	0.45	-0.4
1,310,020	-		MIT1002_01194	0.47	-0.5
1,310,020	-		MIT1002_01194	0.47	-1.5
1,310,020	-		MIT1002_01194	0.47	+0.7
1,310,020	-		MIT1002_01194	0.47	-0.1
1,310,162	-		MIT1002_01194	0.72	+1.4
1,310,183	+		MIT1002_01194	0.75	+0.6
1,310,191	-		MIT1002_01194	0.77	+1.4
1,310,191	-		MIT1002_01194	0.77	-1.4
1,310,217	+		MIT1002_01194	0.81	+1.9
1,310,269	-				+1.0
1,310,269	-				+0.1
1,310,386	+				+0.2
1,310,386	+				-0.5
1,310,394	-				-0.2
1,310,394	-				-1.2
1,310,395	+				-0.3
1,310,401	+				+2.1
1,310,446	-				-2.1
1,310,477	+				+0.5
1,310,575	+				+0.5
1,310,596	+				-0.6
1,310,630	+				-0.3
1,310,666	-				+0.1
1,310,801	-		MIT1002_01195	0.13	-0.3
1,310,801	-		MIT1002_01195	0.13	-2.6
1,310,838	-		MIT1002_01195	0.15	+2.1
1,310,968	-		MIT1002_01195	0.22	+1.2
1,310,978	+		MIT1002_01195	0.22	-0.6
1,311,044	+		MIT1002_01195	0.26	-0.4
1,311,117	+		MIT1002_01195	0.29	+0.6
1,311,125	-		MIT1002_01195	0.30	+0.5
1,311,189	-		MIT1002_01195	0.33	+0.8
1,311,189	-		MIT1002_01195	0.33	+0.5
1,311,274	+		MIT1002_01195	0.37	+5.1
1,311,275	+		MIT1002_01195	0.37	+1.5
1,311,283	-		MIT1002_01195	0.38	+0.2
1,311,317	+		MIT1002_01195	0.40	+0.9