Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00131

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 1
140,175	+				+1.5
140,175	+				-0.1
140,175	+				+1.1
140,175	+				+0.6
140,183	-				+0.4
140,183	-				+0.9
140,183	-				+1.5
140,183	-				+0.0
140,183	-				-0.0
140,212	+				+1.1
140,212	+				+0.5
140,212	+				-0.2
140,212	+				-0.1
140,220	-				+0.0
140,220	-				+0.4
140,220	-				-0.3
140,220	-				-2.0
140,220	-				+0.5
140,220	-				+0.5
140,220	-				-1.1
140,220	-				+0.8
140,277	-				-1.6
140,368	+				+0.1
140,375	+				-2.7
140,410	+				+1.0
140,448	+				-0.4
140,537	+		MIT1002_00130	0.17	-1.0
140,558	+		MIT1002_00130	0.21	+0.3
140,588	+		MIT1002_00130	0.26	-1.2
140,596	-		MIT1002_00130	0.27	-0.0
140,596	-		MIT1002_00130	0.27	+0.7
140,596	-		MIT1002_00130	0.27	+0.1
140,596	-		MIT1002_00130	0.27	+0.4
140,596	-		MIT1002_00130	0.27	-0.1
140,598	+		MIT1002_00130	0.27	-0.8
140,603	+		MIT1002_00130	0.28	+1.3
140,604	-		MIT1002_00130	0.28	-1.6
140,627	+		MIT1002_00130	0.32	-0.3
140,659	+		MIT1002_00130	0.37	+0.1
140,660	+		MIT1002_00130	0.37	+0.1
140,813	-		MIT1002_00130	0.63	+1.1
140,827	-		MIT1002_00130	0.65	+0.5
140,914	+		MIT1002_00130	0.80	+0.3
140,914	+		MIT1002_00130	0.80	-2.4
140,914	+		MIT1002_00130	0.80	-0.0
140,924	+		MIT1002_00130	0.81	-0.1
140,945	+		MIT1002_00130	0.85	-0.6
140,957	+		MIT1002_00130	0.87	+0.1
140,992	-				-0.4
141,006	-				-0.9
141,141	+				+1.9
141,141	+				+0.4
141,150	-				+1.4
141,170	+				-1.4
141,265	+		MIT1002_00131	0.36	+0.4
141,325	+		MIT1002_00131	0.54	+1.6
141,333	-		MIT1002_00131	0.57	+1.4
141,333	-		MIT1002_00131	0.57	-0.7
141,335	+		MIT1002_00131	0.58	+0.7
141,343	-		MIT1002_00131	0.60	-0.4
141,449	+				-0.6
141,457	-				+1.1
141,478	-				+0.9
141,548	-				-1.1
141,711	+		MIT1002_00132	0.36	+0.1
141,729	+		MIT1002_00132	0.40	-0.5
141,729	+		MIT1002_00132	0.40	+1.5
141,737	+		MIT1002_00132	0.42	-0.0
141,737	+		MIT1002_00132	0.42	+0.9
141,739	+		MIT1002_00132	0.42	-1.2
141,811	-		MIT1002_00132	0.57	+1.7
141,915	-		MIT1002_00132	0.80	+0.5
141,922	-		MIT1002_00132	0.81	-1.4
141,965	+				-0.2
141,981	-				+0.8
142,000	-				-0.5
142,012	+				+1.0
142,017	+				+0.2
142,017	+				+0.2
142,025	-				-2.0
142,035	-				+0.9
142,040	+				+1.2
142,048	-				-1.0
142,081	-				+0.3
142,135	+				-0.2
142,195	+				-2.0
142,239	+				+0.1
142,247	-				+2.0
142,260	+				+1.8
142,261	+				-0.1
142,262	-				+0.3
142,279	-				-0.3
142,283	+				-1.2
142,328	-				-0.3
142,337	-				-0.4
142,404	-		MIT1002_00133	0.15	-1.0
142,404	-		MIT1002_00133	0.15	+0.3