Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS36655 and QEN71_RS36660 are separated by 141 nucleotides QEN71_RS36660 and QEN71_RS36665 are separated by 64 nucleotides QEN71_RS36665 and QEN71_RS36670 are separated by 38 nucleotides
QEN71_RS36655: QEN71_RS36655 - cysteine synthase A, at 1,606,934 to 1,607,908
_RS36655
QEN71_RS36660: QEN71_RS36660 - DeoR/GlpR family DNA-binding transcription regulator, at 1,608,050 to 1,608,820
_RS36660
QEN71_RS36665: QEN71_RS36665 - 4-hydroxythreonine-4-phosphate dehydrogenase PdxA, at 1,608,885 to 1,609,883
_RS36665
QEN71_RS36670: QEN71_RS36670 - four-carbon acid sugar kinase family protein, at 1,609,922 to 1,611,181
_RS36670
Position (kb)
1608
1609
1610 Strain fitness (log2 ratio)
-1
0
1
2 at 1607.900 kb on + strand at 1607.900 kb on + strand at 1607.963 kb on + strand at 1607.963 kb on + strand at 1608.204 kb on - strand, within QEN71_RS36660 at 1608.452 kb on - strand, within QEN71_RS36660 at 1608.452 kb on - strand, within QEN71_RS36660 at 1608.530 kb on + strand, within QEN71_RS36660 at 1608.853 kb on + strand at 1608.853 kb on + strand at 1608.854 kb on - strand at 1608.865 kb on + strand at 1608.866 kb on - strand at 1609.901 kb on - strand at 1609.901 kb on - strand at 1609.901 kb on - strand at 1609.978 kb on - strand at 1610.288 kb on + strand, within QEN71_RS36670 at 1610.660 kb on - strand, within QEN71_RS36670 at 1610.660 kb on - strand, within QEN71_RS36670 at 1610.663 kb on + strand, within QEN71_RS36670 at 1610.663 kb on + strand, within QEN71_RS36670 at 1610.664 kb on - strand, within QEN71_RS36670 at 1610.664 kb on - strand, within QEN71_RS36670 at 1610.664 kb on - strand, within QEN71_RS36670
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,607,900 + +0.3 1,607,900 + +1.6 1,607,963 + +0.3 1,607,963 + +0.5 1,608,204 - QEN71_RS36660 0.20 +0.4 1,608,452 - QEN71_RS36660 0.52 +2.4 1,608,452 - QEN71_RS36660 0.52 +0.4 1,608,530 + QEN71_RS36660 0.62 +0.6 1,608,853 + -0.3 1,608,853 + -0.8 1,608,854 - +0.3 1,608,865 + +0.6 1,608,866 - -0.6 1,609,901 - +0.0 1,609,901 - -0.4 1,609,901 - -0.8 1,609,978 - -0.7 1,610,288 + QEN71_RS36670 0.29 -0.0 1,610,660 - QEN71_RS36670 0.59 -1.3 1,610,660 - QEN71_RS36670 0.59 +0.4 1,610,663 + QEN71_RS36670 0.59 +0.1 1,610,663 + QEN71_RS36670 0.59 +1.2 1,610,664 - QEN71_RS36670 0.59 -0.9 1,610,664 - QEN71_RS36670 0.59 +0.3 1,610,664 - QEN71_RS36670 0.59 -1.5
Or see this region's nucleotide sequence