Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS24100

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntQEN71_RS24095 and QEN71_RS24100 are separated by 18 nucleotidesQEN71_RS24100 and QEN71_RS24105 are separated by 18 nucleotidesQEN71_RS24105 and QEN71_RS24110 are separated by 174 nucleotides QEN71_RS24095: QEN71_RS24095 - NADH-quinone oxidoreductase subunit L, at 5,362,291 to 5,364,360 _RS24095 QEN71_RS24100: QEN71_RS24100 - NADH-quinone oxidoreductase subunit NuoK, at 5,364,379 to 5,364,684 _RS24100 QEN71_RS24105: QEN71_RS24105 - NADH-quinone oxidoreductase subunit J, at 5,364,703 to 5,365,371 _RS24105 QEN71_RS24110: QEN71_RS24110 - NADH-quinone oxidoreductase subunit NuoI, at 5,365,546 to 5,366,034 _RS24110 Position (kb) 5364 5365Strain fitness (log2 ratio) -1 0 1at 5364.361 kb on - strandat 5364.361 kb on - strandat 5364.361 kb on - strandat 5364.361 kb on - strandat 5364.361 kb on - strandat 5364.361 kb on - strandat 5364.381 kb on - strandat 5364.685 kb on - strandat 5364.685 kb on - strandat 5365.536 kb on - strandat 5365.548 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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5,364,361 - +0.4
5,364,361 - +0.5
5,364,361 - +1.0
5,364,361 - +0.5
5,364,361 - -0.4
5,364,361 - +1.5
5,364,381 - -1.3
5,364,685 - -0.9
5,364,685 - -1.1
5,365,536 - -1.4
5,365,548 - -0.8

Or see this region's nucleotide sequence