Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS03330 and QEN71_RS03335 are separated by 529 nucleotides QEN71_RS03335 and QEN71_RS03340 are separated by 228 nucleotides
QEN71_RS03330: QEN71_RS03330 - glucose-6-phosphate dehydrogenase, at 739,150 to 740,607
_RS03330
QEN71_RS03335: QEN71_RS03335 - ABC transporter substrate-binding protein, at 741,137 to 742,384
_RS03335
QEN71_RS03340: QEN71_RS03340 - sugar ABC transporter permease, at 742,613 to 743,491
_RS03340
Position (kb) 741
742
743 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 740.166 kb on - strand, within QEN71_RS03330 at 740.166 kb on - strand, within QEN71_RS03330 at 740.166 kb on - strand, within QEN71_RS03330 at 740.166 kb on - strand, within QEN71_RS03330 at 740.267 kb on + strand, within QEN71_RS03330 at 740.267 kb on + strand, within QEN71_RS03330 at 740.267 kb on + strand, within QEN71_RS03330 at 740.268 kb on - strand, within QEN71_RS03330 at 740.268 kb on - strand, within QEN71_RS03330 at 740.351 kb on + strand, within QEN71_RS03330 at 740.351 kb on + strand, within QEN71_RS03330 at 740.351 kb on + strand, within QEN71_RS03330 at 740.351 kb on + strand, within QEN71_RS03330 at 740.351 kb on + strand, within QEN71_RS03330 at 740.352 kb on - strand, within QEN71_RS03330 at 740.352 kb on - strand, within QEN71_RS03330 at 740.352 kb on - strand, within QEN71_RS03330 at 740.352 kb on - strand, within QEN71_RS03330 at 740.367 kb on + strand, within QEN71_RS03330 at 740.445 kb on - strand, within QEN71_RS03330 at 740.445 kb on - strand, within QEN71_RS03330 at 740.445 kb on - strand, within QEN71_RS03330 at 740.525 kb on + strand at 740.525 kb on + strand at 740.525 kb on + strand at 740.526 kb on - strand at 740.592 kb on + strand at 740.592 kb on + strand at 740.592 kb on + strand at 740.592 kb on + strand at 740.592 kb on + strand at 740.592 kb on + strand at 740.592 kb on + strand at 740.592 kb on + strand at 740.592 kb on + strand at 740.593 kb on - strand at 740.593 kb on - strand at 740.593 kb on - strand at 740.593 kb on - strand at 740.593 kb on - strand at 740.593 kb on - strand at 740.593 kb on - strand at 740.593 kb on - strand at 740.593 kb on - strand at 740.593 kb on - strand at 740.593 kb on - strand at 740.681 kb on - strand at 740.689 kb on + strand at 740.690 kb on - strand at 740.690 kb on - strand at 740.690 kb on - strand at 740.708 kb on + strand at 740.709 kb on - strand at 740.772 kb on + strand at 740.772 kb on + strand at 740.772 kb on + strand at 740.772 kb on + strand at 740.772 kb on + strand at 740.772 kb on + strand at 740.772 kb on + strand at 740.773 kb on - strand at 740.773 kb on - strand at 740.773 kb on - strand at 741.054 kb on + strand at 741.054 kb on + strand at 741.054 kb on + strand at 741.054 kb on + strand at 741.054 kb on + strand at 741.054 kb on + strand at 741.054 kb on + strand at 741.055 kb on - strand at 741.055 kb on - strand at 741.055 kb on - strand at 741.055 kb on - strand at 741.109 kb on + strand at 741.109 kb on + strand at 741.110 kb on - strand at 741.110 kb on - strand at 741.131 kb on + strand at 741.131 kb on + strand at 741.131 kb on + strand at 741.131 kb on + strand at 741.131 kb on + strand at 741.131 kb on + strand at 741.131 kb on + strand at 741.131 kb on + strand at 741.131 kb on + strand at 741.131 kb on + strand at 741.131 kb on + strand at 741.131 kb on + strand at 741.132 kb on - strand at 741.132 kb on - strand at 741.132 kb on - strand at 741.132 kb on - strand at 741.132 kb on - strand at 741.132 kb on - strand at 741.132 kb on - strand at 741.132 kb on - strand at 741.132 kb on - strand at 741.132 kb on - strand at 741.132 kb on - strand at 741.299 kb on + strand, within QEN71_RS03335 at 741.299 kb on + strand, within QEN71_RS03335 at 741.299 kb on + strand, within QEN71_RS03335 at 741.300 kb on - strand, within QEN71_RS03335 at 741.300 kb on - strand, within QEN71_RS03335 at 741.300 kb on - strand, within QEN71_RS03335 at 741.300 kb on - strand, within QEN71_RS03335 at 741.527 kb on + strand, within QEN71_RS03335 at 741.528 kb on - strand, within QEN71_RS03335 at 741.528 kb on - strand, within QEN71_RS03335 at 741.528 kb on - strand, within QEN71_RS03335 at 741.528 kb on - strand, within QEN71_RS03335 at 741.528 kb on - strand, within QEN71_RS03335 at 741.528 kb on - strand, within QEN71_RS03335 at 741.569 kb on + strand, within QEN71_RS03335 at 741.569 kb on + strand, within QEN71_RS03335 at 741.569 kb on + strand, within QEN71_RS03335 at 741.569 kb on + strand, within QEN71_RS03335 at 741.569 kb on + strand, within QEN71_RS03335 at 741.569 kb on + strand, within QEN71_RS03335 at 741.570 kb on - strand, within QEN71_RS03335 at 741.570 kb on - strand, within QEN71_RS03335 at 741.570 kb on - strand, within QEN71_RS03335 at 741.570 kb on - strand, within QEN71_RS03335 at 741.570 kb on - strand, within QEN71_RS03335 at 741.749 kb on + strand, within QEN71_RS03335 at 741.749 kb on + strand, within QEN71_RS03335 at 741.749 kb on + strand, within QEN71_RS03335 at 741.749 kb on + strand, within QEN71_RS03335 at 741.750 kb on - strand, within QEN71_RS03335 at 741.750 kb on - strand, within QEN71_RS03335 at 741.750 kb on - strand, within QEN71_RS03335 at 741.750 kb on - strand, within QEN71_RS03335 at 741.839 kb on + strand, within QEN71_RS03335 at 741.839 kb on + strand, within QEN71_RS03335 at 741.839 kb on + strand, within QEN71_RS03335 at 741.839 kb on + strand, within QEN71_RS03335 at 741.840 kb on - strand, within QEN71_RS03335 at 741.840 kb on - strand, within QEN71_RS03335 at 741.840 kb on - strand, within QEN71_RS03335 at 741.857 kb on - strand, within QEN71_RS03335 at 741.977 kb on + strand, within QEN71_RS03335 at 741.977 kb on + strand, within QEN71_RS03335 at 741.977 kb on + strand, within QEN71_RS03335 at 741.977 kb on + strand, within QEN71_RS03335 at 741.977 kb on + strand, within QEN71_RS03335 at 741.977 kb on + strand, within QEN71_RS03335 at 741.977 kb on + strand, within QEN71_RS03335 at 741.977 kb on + strand, within QEN71_RS03335 at 741.977 kb on + strand, within QEN71_RS03335 at 741.978 kb on - strand, within QEN71_RS03335 at 741.978 kb on - strand, within QEN71_RS03335 at 741.978 kb on - strand, within QEN71_RS03335 at 741.978 kb on - strand, within QEN71_RS03335 at 742.013 kb on + strand, within QEN71_RS03335 at 742.013 kb on + strand, within QEN71_RS03335 at 742.013 kb on + strand, within QEN71_RS03335 at 742.013 kb on + strand, within QEN71_RS03335 at 742.014 kb on - strand, within QEN71_RS03335 at 742.014 kb on - strand, within QEN71_RS03335 at 742.136 kb on + strand, within QEN71_RS03335 at 742.136 kb on + strand, within QEN71_RS03335 at 742.136 kb on + strand, within QEN71_RS03335 at 742.136 kb on + strand, within QEN71_RS03335 at 742.136 kb on + strand, within QEN71_RS03335 at 742.136 kb on + strand, within QEN71_RS03335 at 742.136 kb on + strand, within QEN71_RS03335 at 742.136 kb on + strand, within QEN71_RS03335 at 742.137 kb on - strand, within QEN71_RS03335 at 742.137 kb on - strand, within QEN71_RS03335 at 742.137 kb on - strand, within QEN71_RS03335 at 742.137 kb on - strand, within QEN71_RS03335 at 742.137 kb on - strand, within QEN71_RS03335 at 742.137 kb on - strand, within QEN71_RS03335 at 742.137 kb on - strand, within QEN71_RS03335 at 742.177 kb on + strand, within QEN71_RS03335 at 742.205 kb on + strand, within QEN71_RS03335 at 742.205 kb on + strand, within QEN71_RS03335 at 742.205 kb on + strand, within QEN71_RS03335 at 742.205 kb on + strand, within QEN71_RS03335 at 742.206 kb on - strand, within QEN71_RS03335 at 742.206 kb on - strand, within QEN71_RS03335 at 742.206 kb on - strand, within QEN71_RS03335 at 742.206 kb on - strand, within QEN71_RS03335 at 742.242 kb on - strand, within QEN71_RS03335 at 742.242 kb on - strand, within QEN71_RS03335 at 742.242 kb on - strand, within QEN71_RS03335 at 742.382 kb on + strand at 742.382 kb on + strand at 742.382 kb on + strand at 742.382 kb on + strand at 742.382 kb on + strand at 742.382 kb on + strand at 742.382 kb on + strand at 742.382 kb on + strand at 742.383 kb on - strand at 742.383 kb on - strand at 742.383 kb on - strand at 742.394 kb on - strand at 742.404 kb on + strand at 742.404 kb on + strand at 742.404 kb on + strand at 742.404 kb on + strand at 742.405 kb on - strand at 742.405 kb on - strand at 742.405 kb on - strand at 742.405 kb on - strand at 742.432 kb on + strand at 742.432 kb on + strand at 742.433 kb on - strand at 742.433 kb on - strand at 742.529 kb on + strand at 742.529 kb on + strand at 742.530 kb on - strand at 742.530 kb on - strand at 742.530 kb on - strand at 742.561 kb on + strand at 742.561 kb on + strand at 742.561 kb on + strand at 742.562 kb on - strand at 742.562 kb on - strand at 742.562 kb on - strand at 742.689 kb on - strand at 742.713 kb on - strand, within QEN71_RS03340 at 742.713 kb on - strand, within QEN71_RS03340 at 742.748 kb on + strand, within QEN71_RS03340 at 742.749 kb on - strand, within QEN71_RS03340 at 742.772 kb on + strand, within QEN71_RS03340 at 743.210 kb on + strand, within QEN71_RS03340 at 743.210 kb on + strand, within QEN71_RS03340 at 743.211 kb on - strand, within QEN71_RS03340 at 743.211 kb on - strand, within QEN71_RS03340 at 743.211 kb on - strand, within QEN71_RS03340 at 743.211 kb on - strand, within QEN71_RS03340 at 743.360 kb on + strand, within QEN71_RS03340 at 743.360 kb on + strand, within QEN71_RS03340 at 743.360 kb on + strand, within QEN71_RS03340 at 743.360 kb on + strand, within QEN71_RS03340 at 743.360 kb on + strand, within QEN71_RS03340 at 743.360 kb on + strand, within QEN71_RS03340 at 743.361 kb on - strand, within QEN71_RS03340 at 743.361 kb on - strand, within QEN71_RS03340 at 743.361 kb on - strand, within QEN71_RS03340 at 743.361 kb on - strand, within QEN71_RS03340 at 743.361 kb on - strand, within QEN71_RS03340
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 740,166 - QEN71_RS03330 0.70 -2.7 740,166 - QEN71_RS03330 0.70 -3.3 740,166 - QEN71_RS03330 0.70 -1.5 740,166 - QEN71_RS03330 0.70 -1.6 740,267 + QEN71_RS03330 0.77 -1.3 740,267 + QEN71_RS03330 0.77 -2.0 740,267 + QEN71_RS03330 0.77 -1.1 740,268 - QEN71_RS03330 0.77 -3.7 740,268 - QEN71_RS03330 0.77 -4.5 740,351 + QEN71_RS03330 0.82 -3.6 740,351 + QEN71_RS03330 0.82 -2.4 740,351 + QEN71_RS03330 0.82 -0.6 740,351 + QEN71_RS03330 0.82 -0.5 740,351 + QEN71_RS03330 0.82 -1.9 740,352 - QEN71_RS03330 0.82 -2.9 740,352 - QEN71_RS03330 0.82 -0.5 740,352 - QEN71_RS03330 0.82 -0.1 740,352 - QEN71_RS03330 0.82 -3.2 740,367 + QEN71_RS03330 0.83 -2.2 740,445 - QEN71_RS03330 0.89 -1.8 740,445 - QEN71_RS03330 0.89 -0.9 740,445 - QEN71_RS03330 0.89 -2.8 740,525 + -1.6 740,525 + -0.3 740,525 + -0.3 740,526 - -2.0 740,592 + -1.5 740,592 + -2.8 740,592 + -1.1 740,592 + -0.9 740,592 + -2.2 740,592 + -0.3 740,592 + -0.6 740,592 + -2.8 740,592 + -2.8 740,593 - -2.0 740,593 - -1.1 740,593 - -0.3 740,593 - -2.6 740,593 - -1.3 740,593 - -1.6 740,593 - -3.0 740,593 - -1.3 740,593 - +0.7 740,593 - -2.7 740,593 - -2.2 740,681 - -0.1 740,689 + -2.1 740,690 - -1.4 740,690 - -3.3 740,690 - -1.6 740,708 + +0.7 740,709 - -2.6 740,772 + +0.6 740,772 + +1.3 740,772 + -0.2 740,772 + +1.5 740,772 + +0.2 740,772 + -1.6 740,772 + +1.0 740,773 - -4.4 740,773 - -1.5 740,773 - -3.0 741,054 + +1.3 741,054 + +2.2 741,054 + +2.3 741,054 + +2.5 741,054 + +2.7 741,054 + +2.9 741,054 + +2.0 741,055 - -0.3 741,055 - -2.3 741,055 - -1.9 741,055 - -2.9 741,109 + -1.2 741,109 + -1.1 741,110 - -1.3 741,110 - -2.7 741,131 + -5.0 741,131 + -4.3 741,131 + -3.6 741,131 + -4.1 741,131 + -0.9 741,131 + -2.1 741,131 + -5.1 741,131 + -2.7 741,131 + -3.8 741,131 + -2.6 741,131 + -2.5 741,131 + -3.0 741,132 - -3.8 741,132 - -3.3 741,132 - -3.8 741,132 - -3.0 741,132 - -2.6 741,132 - -2.1 741,132 - -3.2 741,132 - -2.7 741,132 - -3.0 741,132 - -2.4 741,132 - -2.5 741,299 + QEN71_RS03335 0.13 -0.9 741,299 + QEN71_RS03335 0.13 -3.8 741,299 + QEN71_RS03335 0.13 -3.6 741,300 - QEN71_RS03335 0.13 -0.9 741,300 - QEN71_RS03335 0.13 -0.3 741,300 - QEN71_RS03335 0.13 -5.3 741,300 - QEN71_RS03335 0.13 -4.4 741,527 + QEN71_RS03335 0.31 -2.6 741,528 - QEN71_RS03335 0.31 -2.7 741,528 - QEN71_RS03335 0.31 -4.8 741,528 - QEN71_RS03335 0.31 -3.3 741,528 - QEN71_RS03335 0.31 -3.3 741,528 - QEN71_RS03335 0.31 -4.2 741,528 - QEN71_RS03335 0.31 -2.4 741,569 + QEN71_RS03335 0.35 -0.6 741,569 + QEN71_RS03335 0.35 -1.7 741,569 + QEN71_RS03335 0.35 -3.4 741,569 + QEN71_RS03335 0.35 -3.0 741,569 + QEN71_RS03335 0.35 -4.3 741,569 + QEN71_RS03335 0.35 -2.6 741,570 - QEN71_RS03335 0.35 -3.8 741,570 - QEN71_RS03335 0.35 -3.9 741,570 - QEN71_RS03335 0.35 -4.0 741,570 - QEN71_RS03335 0.35 -1.7 741,570 - QEN71_RS03335 0.35 -1.3 741,749 + QEN71_RS03335 0.49 -1.6 741,749 + QEN71_RS03335 0.49 -3.4 741,749 + QEN71_RS03335 0.49 -3.2 741,749 + QEN71_RS03335 0.49 -1.1 741,750 - QEN71_RS03335 0.49 -3.3 741,750 - QEN71_RS03335 0.49 -4.9 741,750 - QEN71_RS03335 0.49 -5.2 741,750 - QEN71_RS03335 0.49 -1.1 741,839 + QEN71_RS03335 0.56 -4.4 741,839 + QEN71_RS03335 0.56 -1.3 741,839 + QEN71_RS03335 0.56 -3.2 741,839 + QEN71_RS03335 0.56 -1.1 741,840 - QEN71_RS03335 0.56 -1.3 741,840 - QEN71_RS03335 0.56 -1.6 741,840 - QEN71_RS03335 0.56 -2.5 741,857 - QEN71_RS03335 0.58 -3.7 741,977 + QEN71_RS03335 0.67 -0.9 741,977 + QEN71_RS03335 0.67 -5.5 741,977 + QEN71_RS03335 0.67 -0.6 741,977 + QEN71_RS03335 0.67 -0.3 741,977 + QEN71_RS03335 0.67 -3.1 741,977 + QEN71_RS03335 0.67 -3.8 741,977 + QEN71_RS03335 0.67 -4.4 741,977 + QEN71_RS03335 0.67 -2.8 741,977 + QEN71_RS03335 0.67 -2.3 741,978 - QEN71_RS03335 0.67 -0.3 741,978 - QEN71_RS03335 0.67 -2.1 741,978 - QEN71_RS03335 0.67 -1.3 741,978 - QEN71_RS03335 0.67 -1.6 742,013 + QEN71_RS03335 0.70 -3.3 742,013 + QEN71_RS03335 0.70 -2.8 742,013 + QEN71_RS03335 0.70 -3.8 742,013 + QEN71_RS03335 0.70 -1.6 742,014 - QEN71_RS03335 0.70 -4.5 742,014 - QEN71_RS03335 0.70 -3.5 742,136 + QEN71_RS03335 0.80 -3.4 742,136 + QEN71_RS03335 0.80 -2.2 742,136 + QEN71_RS03335 0.80 -2.4 742,136 + QEN71_RS03335 0.80 -2.8 742,136 + QEN71_RS03335 0.80 -2.9 742,136 + QEN71_RS03335 0.80 -1.8 742,136 + QEN71_RS03335 0.80 -0.3 742,136 + QEN71_RS03335 0.80 -0.1 742,137 - QEN71_RS03335 0.80 -2.5 742,137 - QEN71_RS03335 0.80 -1.1 742,137 - QEN71_RS03335 0.80 -1.1 742,137 - QEN71_RS03335 0.80 -4.1 742,137 - QEN71_RS03335 0.80 -4.0 742,137 - QEN71_RS03335 0.80 -2.0 742,137 - QEN71_RS03335 0.80 -2.7 742,177 + QEN71_RS03335 0.83 -3.2 742,205 + QEN71_RS03335 0.86 -5.2 742,205 + QEN71_RS03335 0.86 -3.4 742,205 + QEN71_RS03335 0.86 -2.9 742,205 + QEN71_RS03335 0.86 -1.2 742,206 - QEN71_RS03335 0.86 -3.9 742,206 - QEN71_RS03335 0.86 -1.5 742,206 - QEN71_RS03335 0.86 -0.3 742,206 - QEN71_RS03335 0.86 -2.5 742,242 - QEN71_RS03335 0.89 -2.8 742,242 - QEN71_RS03335 0.89 -1.7 742,242 - QEN71_RS03335 0.89 -1.8 742,382 + -1.9 742,382 + -0.8 742,382 + -2.1 742,382 + -1.4 742,382 + -0.5 742,382 + -0.8 742,382 + -1.6 742,382 + -1.7 742,383 - -1.7 742,383 - -2.1 742,383 - -2.9 742,394 - -0.6 742,404 + -1.0 742,404 + +1.1 742,404 + -0.2 742,404 + -0.6 742,405 - -3.8 742,405 - -1.8 742,405 - -2.5 742,405 - -1.1 742,432 + +0.5 742,432 + -0.3 742,433 - -2.1 742,433 - -3.4 742,529 + -3.5 742,529 + -0.2 742,530 - -1.5 742,530 - -2.6 742,530 - +0.7 742,561 + -0.9 742,561 + -1.1 742,561 + -3.5 742,562 - -3.5 742,562 - -2.9 742,562 - -3.8 742,689 - -2.9 742,713 - QEN71_RS03340 0.11 -4.6 742,713 - QEN71_RS03340 0.11 -3.2 742,748 + QEN71_RS03340 0.15 +0.4 742,749 - QEN71_RS03340 0.15 -4.2 742,772 + QEN71_RS03340 0.18 -4.6 743,210 + QEN71_RS03340 0.68 -3.8 743,210 + QEN71_RS03340 0.68 -2.4 743,211 - QEN71_RS03340 0.68 -2.2 743,211 - QEN71_RS03340 0.68 -4.4 743,211 - QEN71_RS03340 0.68 +0.1 743,211 - QEN71_RS03340 0.68 -4.8 743,360 + QEN71_RS03340 0.85 -3.2 743,360 + QEN71_RS03340 0.85 -2.6 743,360 + QEN71_RS03340 0.85 -2.5 743,360 + QEN71_RS03340 0.85 -1.5 743,360 + QEN71_RS03340 0.85 -1.1 743,360 + QEN71_RS03340 0.85 -3.4 743,361 - QEN71_RS03340 0.85 -2.2 743,361 - QEN71_RS03340 0.85 -3.0 743,361 - QEN71_RS03340 0.85 -1.1 743,361 - QEN71_RS03340 0.85 -1.3 743,361 - QEN71_RS03340 0.85 -3.9
Or see this region's nucleotide sequence