Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS00145

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntQEN71_RS00140 and QEN71_RS00145 are separated by 294 nucleotidesQEN71_RS00145 and QEN71_RS00150 are separated by 54 nucleotides QEN71_RS00140: QEN71_RS00140 - DNA topoisomerase III, at 28,551 to 31,211 _RS00140 QEN71_RS00145: QEN71_RS00145 - thioredoxin family protein, at 31,506 to 31,883 _RS00145 QEN71_RS00150: QEN71_RS00150 - DNA-processing protein DprA, at 31,938 to 33,113 _RS00150 Position (kb) 31 32Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 31.222 kb on - strandat 31.244 kb on - strandat 31.291 kb on - strandat 31.291 kb on - strandat 31.291 kb on - strandat 31.293 kb on - strandat 31.293 kb on - strandat 31.293 kb on - strandat 31.344 kb on + strandat 31.344 kb on + strandat 31.344 kb on + strandat 31.344 kb on + strandat 31.344 kb on + strandat 31.344 kb on + strandat 31.344 kb on + strandat 31.344 kb on + strandat 31.344 kb on + strandat 31.345 kb on - strandat 31.345 kb on - strandat 31.345 kb on - strandat 31.345 kb on - strandat 31.345 kb on - strandat 31.402 kb on + strandat 31.402 kb on + strandat 31.402 kb on + strandat 31.402 kb on + strandat 31.403 kb on - strandat 31.403 kb on - strandat 31.403 kb on - strandat 31.906 kb on + strandat 31.906 kb on + strandat 31.906 kb on + strandat 31.906 kb on + strandat 31.906 kb on + strandat 31.906 kb on + strandat 31.906 kb on + strandat 31.906 kb on + strandat 31.906 kb on + strandat 31.907 kb on - strandat 31.907 kb on - strandat 31.907 kb on - strandat 31.907 kb on - strandat 31.907 kb on - strandat 31.907 kb on - strandat 31.907 kb on - strandat 31.907 kb on - strandat 31.907 kb on - strandat 31.907 kb on - strandat 31.907 kb on - strandat 31.907 kb on - strandat 31.907 kb on - strandat 31.907 kb on - strandat 31.907 kb on - strandat 31.907 kb on - strandat 31.907 kb on - strandat 31.907 kb on - strandat 31.907 kb on - strandat 31.907 kb on - strandat 31.907 kb on - strandat 31.911 kb on + strandat 31.911 kb on + strandat 31.911 kb on + strandat 31.911 kb on + strandat 31.911 kb on + strandat 31.911 kb on + strandat 31.912 kb on - strandat 31.912 kb on - strandat 31.912 kb on - strandat 31.912 kb on - strandat 31.912 kb on - strandat 31.912 kb on - strandat 31.912 kb on - strandat 31.912 kb on - strandat 31.912 kb on - strandat 31.926 kb on + strandat 31.926 kb on + strandat 31.926 kb on + strandat 31.926 kb on + strandat 31.926 kb on + strandat 31.926 kb on + strandat 31.926 kb on + strandat 31.927 kb on - strandat 31.927 kb on - strandat 31.927 kb on - strandat 31.963 kb on + strandat 32.412 kb on + strand, within QEN71_RS00150at 32.412 kb on + strand, within QEN71_RS00150at 32.412 kb on + strand, within QEN71_RS00150at 32.412 kb on + strand, within QEN71_RS00150at 32.412 kb on + strand, within QEN71_RS00150at 32.413 kb on - strand, within QEN71_RS00150at 32.413 kb on - strand, within QEN71_RS00150at 32.413 kb on - strand, within QEN71_RS00150at 32.413 kb on - strand, within QEN71_RS00150at 32.478 kb on - strand, within QEN71_RS00150at 32.551 kb on + strand, within QEN71_RS00150at 32.739 kb on + strand, within QEN71_RS00150at 32.781 kb on + strand, within QEN71_RS00150at 32.781 kb on + strand, within QEN71_RS00150at 32.781 kb on + strand, within QEN71_RS00150at 32.781 kb on + strand, within QEN71_RS00150at 32.781 kb on + strand, within QEN71_RS00150at 32.781 kb on + strand, within QEN71_RS00150at 32.781 kb on + strand, within QEN71_RS00150at 32.781 kb on + strand, within QEN71_RS00150at 32.781 kb on + strand, within QEN71_RS00150at 32.781 kb on + strand, within QEN71_RS00150at 32.781 kb on + strand, within QEN71_RS00150at 32.781 kb on + strand, within QEN71_RS00150at 32.781 kb on + strand, within QEN71_RS00150at 32.781 kb on + strand, within QEN71_RS00150at 32.781 kb on + strand, within QEN71_RS00150at 32.781 kb on + strand, within QEN71_RS00150at 32.781 kb on + strand, within QEN71_RS00150at 32.781 kb on + strand, within QEN71_RS00150at 32.781 kb on + strand, within QEN71_RS00150at 32.782 kb on - strand, within QEN71_RS00150at 32.782 kb on - strand, within QEN71_RS00150at 32.782 kb on - strand, within QEN71_RS00150at 32.782 kb on - strand, within QEN71_RS00150at 32.782 kb on - strand, within QEN71_RS00150at 32.782 kb on - strand, within QEN71_RS00150at 32.782 kb on - strand, within QEN71_RS00150at 32.782 kb on - strand, within QEN71_RS00150at 32.782 kb on - strand, within QEN71_RS00150at 32.782 kb on - strand, within QEN71_RS00150at 32.782 kb on - strand, within QEN71_RS00150at 32.782 kb on - strand, within QEN71_RS00150at 32.782 kb on - strand, within QEN71_RS00150at 32.782 kb on - strand, within QEN71_RS00150at 32.782 kb on - strand, within QEN71_RS00150at 32.782 kb on - strand, within QEN71_RS00150at 32.782 kb on - strand, within QEN71_RS00150at 32.782 kb on - strand, within QEN71_RS00150at 32.785 kb on + strand, within QEN71_RS00150at 32.785 kb on + strand, within QEN71_RS00150at 32.785 kb on + strand, within QEN71_RS00150at 32.785 kb on + strand, within QEN71_RS00150at 32.785 kb on + strand, within QEN71_RS00150at 32.785 kb on + strand, within QEN71_RS00150at 32.785 kb on + strand, within QEN71_RS00150at 32.785 kb on + strand, within QEN71_RS00150at 32.785 kb on + strand, within QEN71_RS00150at 32.785 kb on + strand, within QEN71_RS00150at 32.785 kb on + strand, within QEN71_RS00150at 32.785 kb on + strand, within QEN71_RS00150at 32.785 kb on + strand, within QEN71_RS00150at 32.785 kb on + strand, within QEN71_RS00150at 32.785 kb on + strand, within QEN71_RS00150at 32.785 kb on + strand, within QEN71_RS00150at 32.785 kb on + strand, within QEN71_RS00150at 32.785 kb on + strand, within QEN71_RS00150at 32.785 kb on + strand, within QEN71_RS00150at 32.785 kb on + strand, within QEN71_RS00150at 32.786 kb on - strand, within QEN71_RS00150at 32.786 kb on - strand, within QEN71_RS00150at 32.786 kb on - strand, within QEN71_RS00150at 32.786 kb on - strand, within QEN71_RS00150at 32.786 kb on - strand, within QEN71_RS00150at 32.786 kb on - strand, within QEN71_RS00150at 32.786 kb on - strand, within QEN71_RS00150at 32.786 kb on - strand, within QEN71_RS00150at 32.786 kb on - strand, within QEN71_RS00150at 32.786 kb on - strand, within QEN71_RS00150at 32.786 kb on - strand, within QEN71_RS00150at 32.786 kb on - strand, within QEN71_RS00150at 32.786 kb on - strand, within QEN71_RS00150at 32.786 kb on - strand, within QEN71_RS00150at 32.786 kb on - strand, within QEN71_RS00150at 32.787 kb on + strand, within QEN71_RS00150at 32.787 kb on + strand, within QEN71_RS00150at 32.787 kb on + strand, within QEN71_RS00150at 32.787 kb on + strand, within QEN71_RS00150at 32.787 kb on + strand, within QEN71_RS00150at 32.787 kb on + strand, within QEN71_RS00150at 32.787 kb on + strand, within QEN71_RS00150at 32.787 kb on + strand, within QEN71_RS00150at 32.787 kb on + strand, within QEN71_RS00150at 32.787 kb on + strand, within QEN71_RS00150at 32.787 kb on + strand, within QEN71_RS00150at 32.787 kb on + strand, within QEN71_RS00150at 32.787 kb on + strand, within QEN71_RS00150at 32.787 kb on + strand, within QEN71_RS00150at 32.787 kb on + strand, within QEN71_RS00150at 32.787 kb on + strand, within QEN71_RS00150at 32.788 kb on - strand, within QEN71_RS00150at 32.788 kb on - strand, within QEN71_RS00150at 32.788 kb on - strand, within QEN71_RS00150at 32.788 kb on - strand, within QEN71_RS00150at 32.788 kb on - strand, within QEN71_RS00150at 32.788 kb on - strand, within QEN71_RS00150at 32.788 kb on - strand, within QEN71_RS00150at 32.788 kb on - strand, within QEN71_RS00150at 32.788 kb on - strand, within QEN71_RS00150at 32.788 kb on - strand, within QEN71_RS00150at 32.788 kb on - strand, within QEN71_RS00150at 32.788 kb on - strand, within QEN71_RS00150at 32.831 kb on - strand, within QEN71_RS00150

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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31,222 - -0.7
31,244 - -0.3
31,291 - -0.3
31,291 - -1.8
31,291 - -1.3
31,293 - +0.3
31,293 - -1.4
31,293 - -1.3
31,344 + +0.3
31,344 + -0.1
31,344 + +0.7
31,344 + -0.9
31,344 + -0.3
31,344 + -0.0
31,344 + +0.5
31,344 + +0.7
31,344 + +1.3
31,345 - -2.1
31,345 - -2.8
31,345 - -2.5
31,345 - -1.2
31,345 - -1.5
31,402 + -0.3
31,402 + +0.4
31,402 + +0.2
31,402 + +1.2
31,403 - -0.3
31,403 - -1.9
31,403 - -3.0
31,906 + -2.1
31,906 + -0.7
31,906 + +1.7
31,906 + +0.7
31,906 + +1.3
31,906 + +2.0
31,906 + -1.1
31,906 + -2.3
31,906 + -1.1
31,907 - -1.3
31,907 - -0.4
31,907 - -0.1
31,907 - +0.6
31,907 - -0.8
31,907 - +0.2
31,907 - -0.1
31,907 - -0.4
31,907 - -1.6
31,907 - -1.2
31,907 - +2.0
31,907 - +0.4
31,907 - -1.3
31,907 - -0.0
31,907 - -0.1
31,907 - +1.0
31,907 - -1.0
31,907 - -0.1
31,907 - -0.3
31,907 - +0.2
31,907 - -0.5
31,911 + +0.7
31,911 + -1.1
31,911 + -1.2
31,911 + +0.0
31,911 + -0.1
31,911 + -1.5
31,912 - -0.1
31,912 - -0.3
31,912 - -1.9
31,912 - -0.9
31,912 - -1.1
31,912 - -1.1
31,912 - -0.0
31,912 - -0.0
31,912 - -0.7
31,926 + +0.4
31,926 + +0.3
31,926 + -0.3
31,926 + -1.2
31,926 + +0.2
31,926 + -0.1
31,926 + +0.0
31,927 - -0.7
31,927 - +0.8
31,927 - +0.3
31,963 + -0.6
32,412 + QEN71_RS00150 0.40 +1.8
32,412 + QEN71_RS00150 0.40 +1.3
32,412 + QEN71_RS00150 0.40 -0.6
32,412 + QEN71_RS00150 0.40 -0.7
32,412 + QEN71_RS00150 0.40 -0.1
32,413 - QEN71_RS00150 0.40 +1.2
32,413 - QEN71_RS00150 0.40 +0.9
32,413 - QEN71_RS00150 0.40 -1.8
32,413 - QEN71_RS00150 0.40 -0.1
32,478 - QEN71_RS00150 0.46 +0.3
32,551 + QEN71_RS00150 0.52 -0.9
32,739 + QEN71_RS00150 0.68 +1.3
32,781 + QEN71_RS00150 0.72 +0.7
32,781 + QEN71_RS00150 0.72 -0.4
32,781 + QEN71_RS00150 0.72 -0.2
32,781 + QEN71_RS00150 0.72 -0.1
32,781 + QEN71_RS00150 0.72 -0.4
32,781 + QEN71_RS00150 0.72 -0.2
32,781 + QEN71_RS00150 0.72 +0.1
32,781 + QEN71_RS00150 0.72 +0.1
32,781 + QEN71_RS00150 0.72 +0.2
32,781 + QEN71_RS00150 0.72 -0.3
32,781 + QEN71_RS00150 0.72 -0.1
32,781 + QEN71_RS00150 0.72 -1.8
32,781 + QEN71_RS00150 0.72 -1.2
32,781 + QEN71_RS00150 0.72 -0.6
32,781 + QEN71_RS00150 0.72 +0.6
32,781 + QEN71_RS00150 0.72 -0.2
32,781 + QEN71_RS00150 0.72 -0.4
32,781 + QEN71_RS00150 0.72 -2.4
32,781 + QEN71_RS00150 0.72 +0.2
32,782 - QEN71_RS00150 0.72 +1.0
32,782 - QEN71_RS00150 0.72 +0.2
32,782 - QEN71_RS00150 0.72 +0.6
32,782 - QEN71_RS00150 0.72 +0.3
32,782 - QEN71_RS00150 0.72 -0.4
32,782 - QEN71_RS00150 0.72 +0.0
32,782 - QEN71_RS00150 0.72 -0.3
32,782 - QEN71_RS00150 0.72 -1.4
32,782 - QEN71_RS00150 0.72 -0.2
32,782 - QEN71_RS00150 0.72 +0.1
32,782 - QEN71_RS00150 0.72 +1.0
32,782 - QEN71_RS00150 0.72 -0.5
32,782 - QEN71_RS00150 0.72 -0.3
32,782 - QEN71_RS00150 0.72 +0.2
32,782 - QEN71_RS00150 0.72 -0.4
32,782 - QEN71_RS00150 0.72 +1.1
32,782 - QEN71_RS00150 0.72 +0.2
32,782 - QEN71_RS00150 0.72 +0.9
32,785 + QEN71_RS00150 0.72 -0.7
32,785 + QEN71_RS00150 0.72 -0.1
32,785 + QEN71_RS00150 0.72 -1.0
32,785 + QEN71_RS00150 0.72 +1.0
32,785 + QEN71_RS00150 0.72 -0.5
32,785 + QEN71_RS00150 0.72 +0.2
32,785 + QEN71_RS00150 0.72 +0.3
32,785 + QEN71_RS00150 0.72 +0.0
32,785 + QEN71_RS00150 0.72 +0.7
32,785 + QEN71_RS00150 0.72 -0.3
32,785 + QEN71_RS00150 0.72 +0.7
32,785 + QEN71_RS00150 0.72 -0.1
32,785 + QEN71_RS00150 0.72 -0.2
32,785 + QEN71_RS00150 0.72 +0.7
32,785 + QEN71_RS00150 0.72 -1.0
32,785 + QEN71_RS00150 0.72 +0.3
32,785 + QEN71_RS00150 0.72 -0.1
32,785 + QEN71_RS00150 0.72 +0.4
32,785 + QEN71_RS00150 0.72 +1.7
32,785 + QEN71_RS00150 0.72 -0.6
32,786 - QEN71_RS00150 0.72 -0.3
32,786 - QEN71_RS00150 0.72 -1.1
32,786 - QEN71_RS00150 0.72 +0.7
32,786 - QEN71_RS00150 0.72 +0.3
32,786 - QEN71_RS00150 0.72 +0.1
32,786 - QEN71_RS00150 0.72 +0.5
32,786 - QEN71_RS00150 0.72 -0.3
32,786 - QEN71_RS00150 0.72 +0.2
32,786 - QEN71_RS00150 0.72 +0.3
32,786 - QEN71_RS00150 0.72 +0.3
32,786 - QEN71_RS00150 0.72 -0.3
32,786 - QEN71_RS00150 0.72 +1.5
32,786 - QEN71_RS00150 0.72 -0.8
32,786 - QEN71_RS00150 0.72 -0.0
32,786 - QEN71_RS00150 0.72 +0.1
32,787 + QEN71_RS00150 0.72 -0.8
32,787 + QEN71_RS00150 0.72 +0.7
32,787 + QEN71_RS00150 0.72 -0.7
32,787 + QEN71_RS00150 0.72 -2.9
32,787 + QEN71_RS00150 0.72 -0.5
32,787 + QEN71_RS00150 0.72 +0.9
32,787 + QEN71_RS00150 0.72 -1.8
32,787 + QEN71_RS00150 0.72 -1.0
32,787 + QEN71_RS00150 0.72 +1.1
32,787 + QEN71_RS00150 0.72 -0.0
32,787 + QEN71_RS00150 0.72 -1.9
32,787 + QEN71_RS00150 0.72 +0.9
32,787 + QEN71_RS00150 0.72 +0.3
32,787 + QEN71_RS00150 0.72 -0.5
32,787 + QEN71_RS00150 0.72 +0.9
32,787 + QEN71_RS00150 0.72 -0.9
32,788 - QEN71_RS00150 0.72 +0.1
32,788 - QEN71_RS00150 0.72 -1.0
32,788 - QEN71_RS00150 0.72 +0.5
32,788 - QEN71_RS00150 0.72 +1.1
32,788 - QEN71_RS00150 0.72 -1.1
32,788 - QEN71_RS00150 0.72 +0.5
32,788 - QEN71_RS00150 0.72 -0.4
32,788 - QEN71_RS00150 0.72 -0.3
32,788 - QEN71_RS00150 0.72 -0.4
32,788 - QEN71_RS00150 0.72 -0.6
32,788 - QEN71_RS00150 0.72 -0.2
32,788 - QEN71_RS00150 0.72 +0.4
32,831 - QEN71_RS00150 0.76 -0.5

Or see this region's nucleotide sequence