Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03566

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 1
3,990,396	+		MIT1002_03564	0.36	+0.1
3,990,399	-		MIT1002_03564	0.36	+0.5
3,990,404	-		MIT1002_03564	0.37	+0.9
3,990,453	+		MIT1002_03564	0.41	-0.1
3,990,521	+		MIT1002_03564	0.46	+0.2
3,990,550	+		MIT1002_03564	0.49	-2.7
3,990,550	-		MIT1002_03564	0.49	-1.4
3,990,558	-		MIT1002_03564	0.49	-1.0
3,990,565	-		MIT1002_03564	0.50	-1.0
3,990,570	-		MIT1002_03564	0.50	-1.7
3,990,570	-		MIT1002_03564	0.50	+0.2
3,990,657	-		MIT1002_03564	0.57	+0.2
3,990,661	-		MIT1002_03564	0.58	-0.6
3,990,663	+		MIT1002_03564	0.58	+0.7
3,990,663	+		MIT1002_03564	0.58	+0.2
3,990,671	-		MIT1002_03564	0.58	-0.6
3,990,671	-		MIT1002_03564	0.58	-0.3
3,990,671	-		MIT1002_03564	0.58	-0.1
3,990,671	-		MIT1002_03564	0.58	-0.6
3,990,671	-		MIT1002_03564	0.58	+0.0
3,990,671	-		MIT1002_03564	0.58	+0.2
3,990,692	-		MIT1002_03564	0.60	-0.1
3,990,705	+		MIT1002_03564	0.61	+0.1
3,990,705	+		MIT1002_03564	0.61	-0.0
3,990,731	-		MIT1002_03564	0.63	+2.5
3,990,808	+		MIT1002_03564	0.69	-0.4
3,990,808	+		MIT1002_03564	0.69	-0.4
3,990,808	+		MIT1002_03564	0.69	-0.0
3,990,808	+		MIT1002_03564	0.69	+0.3
3,990,812	+		MIT1002_03564	0.70	-0.2
3,990,816	-		MIT1002_03564	0.70	-1.3
3,990,818	+		MIT1002_03564	0.70	-0.1
3,990,821	-		MIT1002_03564	0.71	+0.3
3,990,827	+		MIT1002_03564	0.71	-0.4
3,990,830	-		MIT1002_03564	0.71	-0.5
3,990,835	-		MIT1002_03564	0.72	+0.0
3,990,845	-		MIT1002_03564	0.72	+0.8
3,990,899	-		MIT1002_03564	0.77	-0.1
3,990,977	-		MIT1002_03564	0.83	+0.6
3,990,992	+		MIT1002_03564	0.84	-0.1
3,991,031	+		MIT1002_03564	0.87	+0.6
3,991,085	+				-0.3
3,991,096	+				-0.7
3,991,104	+				-0.3
3,991,104	+				-0.3
3,991,104	+				-1.7
3,991,104	+				-0.8
3,991,104	+				-0.5
3,991,104	+				+0.1
3,991,104	+				-0.4
3,991,104	+				-0.9
3,991,111	+				+0.1
3,991,111	+				-1.0
3,991,111	+				-0.2
3,991,112	-				+0.6
3,991,112	-				+0.1
3,991,112	-				-1.6
3,991,112	-				+0.2
3,991,112	-				-2.4
3,991,112	-				-0.2
3,991,112	-				-2.5
3,991,112	-				+0.5
3,991,112	-				-0.3
3,991,112	-				-1.3
3,991,112	-				+0.3
3,991,112	-				+0.4
3,991,119	-				-0.6
3,991,145	-				+0.6
3,991,152	+				-0.0
3,991,152	+				-0.7
3,991,152	+				-0.3
3,991,152	+				+0.3
3,991,155	+				-0.2
3,991,157	+				-0.2
3,991,157	+				+0.1
3,991,160	-				-0.5
3,991,160	-				-1.1
3,991,162	+				-1.3
3,991,165	+				-0.1
3,991,165	-				-2.5
3,991,165	-				-0.1
3,991,170	-				+0.2
3,991,180	+				+1.8
3,991,180	-				-0.0
3,991,180	-				-0.6
3,991,190	+				+0.1
3,991,190	+				-0.9
3,991,190	+				-0.4
3,991,190	+				-0.5
3,991,190	+				+1.4
3,991,194	-				-0.9
3,991,198	-				-0.1
3,991,198	-				+1.0
3,991,198	-				+1.0
3,991,219	-				-2.1
3,991,247	+				+2.4
3,991,255	-				+0.4
3,991,255	-				-0.1
3,991,262	+				-0.2
3,991,275	+				+0.6
3,991,275	+				-1.1
3,991,275	+				-0.1
3,991,275	+				+0.8
3,991,277	+				+0.2
3,991,280	-				-0.7
3,991,283	+				+0.0
3,991,283	-				-1.9
3,991,283	-				+0.3
3,991,283	-				+1.0
3,991,283	-				+0.1
3,991,286	+				+0.2
3,991,291	-		MIT1002_03565	0.10	+0.1
3,991,294	-		MIT1002_03565	0.12	-0.8
3,991,415	+				+0.5
3,991,447	-				-0.1
3,991,447	-				+1.2
3,991,447	-				-0.9
3,991,463	+				-1.0
3,991,469	+		MIT1002_03566	0.10	-0.6
3,991,473	+		MIT1002_03566	0.11	+0.1
3,991,474	+		MIT1002_03566	0.11	-4.1
3,991,477	+		MIT1002_03566	0.11	+0.3
3,991,477	-		MIT1002_03566	0.11	+0.0
3,991,482	-		MIT1002_03566	0.12	+0.1
3,991,490	+		MIT1002_03566	0.13	+0.8
3,991,490	+		MIT1002_03566	0.13	+0.4
3,991,497	+		MIT1002_03566	0.14	-0.9
3,991,502	+		MIT1002_03566	0.15	+0.1
3,991,505	-		MIT1002_03566	0.15	-0.8
3,991,513	+		MIT1002_03566	0.16	-1.1
3,991,530	+		MIT1002_03566	0.18	-0.2
3,991,531	-		MIT1002_03566	0.18	-0.0
3,991,531	-		MIT1002_03566	0.18	-0.1
3,991,557	+		MIT1002_03566	0.21	-0.3
3,991,557	+		MIT1002_03566	0.21	-0.8
3,991,566	+		MIT1002_03566	0.23	+0.0
3,991,566	+		MIT1002_03566	0.23	-0.5
3,991,566	+		MIT1002_03566	0.23	+1.0
3,991,566	+		MIT1002_03566	0.23	-0.1
3,991,566	+		MIT1002_03566	0.23	-0.9
3,991,566	+		MIT1002_03566	0.23	-0.0
3,991,566	+		MIT1002_03566	0.23	+0.9
3,991,566	+		MIT1002_03566	0.23	+0.3
3,991,566	+		MIT1002_03566	0.23	+0.2
3,991,566	+		MIT1002_03566	0.23	+0.0
3,991,566	+		MIT1002_03566	0.23	+0.4
3,991,566	+		MIT1002_03566	0.23	+0.3
3,991,566	+		MIT1002_03566	0.23	-0.2
3,991,566	+		MIT1002_03566	0.23	+0.1
3,991,566	+		MIT1002_03566	0.23	-0.3
3,991,566	+		MIT1002_03566	0.23	-0.0
3,991,566	+		MIT1002_03566	0.23	+0.3
3,991,566	+		MIT1002_03566	0.23	-0.8
3,991,566	+		MIT1002_03566	0.23	-1.9
3,991,566	-		MIT1002_03566	0.23	-1.9
3,991,567	+		MIT1002_03566	0.23	+0.7
3,991,574	-		MIT1002_03566	0.24	+0.7
3,991,574	-		MIT1002_03566	0.24	+1.2
3,991,574	-		MIT1002_03566	0.24	-0.1
3,991,574	-		MIT1002_03566	0.24	-0.0
3,991,574	-		MIT1002_03566	0.24	-2.0
3,991,574	-		MIT1002_03566	0.24	-0.2
3,991,574	-		MIT1002_03566	0.24	+0.7
3,991,574	-		MIT1002_03566	0.24	+0.1
3,991,574	-		MIT1002_03566	0.24	-0.9
3,991,574	-		MIT1002_03566	0.24	+0.5
3,991,574	-		MIT1002_03566	0.24	-0.7
3,991,574	-		MIT1002_03566	0.24	+0.0
3,991,574	-		MIT1002_03566	0.24	+0.2
3,991,574	-		MIT1002_03566	0.24	+0.3
3,991,580	+		MIT1002_03566	0.24	-0.3
3,991,593	+		MIT1002_03566	0.26	+0.0
3,991,620	+		MIT1002_03566	0.29	+0.1
3,991,630	+		MIT1002_03566	0.31	+0.4
3,991,631	-		MIT1002_03566	0.31	+0.1
3,991,637	+		MIT1002_03566	0.31	+0.8
3,991,640	+		MIT1002_03566	0.32	-0.7
3,991,640	+		MIT1002_03566	0.32	+0.4
3,991,655	+		MIT1002_03566	0.34	+0.1
3,991,655	+		MIT1002_03566	0.34	-0.1
3,991,655	+		MIT1002_03566	0.34	-0.2
3,991,655	+		MIT1002_03566	0.34	-1.3
3,991,663	-		MIT1002_03566	0.35	+0.7
3,991,663	-		MIT1002_03566	0.35	+0.9
3,991,663	-		MIT1002_03566	0.35	+0.3
3,991,663	-		MIT1002_03566	0.35	-0.5
3,991,663	-		MIT1002_03566	0.35	-0.1
3,991,663	-		MIT1002_03566	0.35	-0.6
3,991,665	-		MIT1002_03566	0.35	-1.8
3,991,687	+		MIT1002_03566	0.38	+0.3
3,991,689	-		MIT1002_03566	0.38	-1.0
3,991,715	+		MIT1002_03566	0.41	-0.3
3,991,716	+		MIT1002_03566	0.41	-2.4
3,991,716	+		MIT1002_03566	0.41	+0.0
3,991,725	-		MIT1002_03566	0.42	+0.3
3,991,814	-		MIT1002_03566	0.54	-0.1
3,991,816	+		MIT1002_03566	0.54	-0.3
3,991,824	-		MIT1002_03566	0.55	-0.1
3,991,844	+		MIT1002_03566	0.57	-0.6
3,991,844	+		MIT1002_03566	0.57	-0.7
3,991,852	-		MIT1002_03566	0.58	-0.7
3,991,911	+		MIT1002_03566	0.66	+0.2
3,991,911	+		MIT1002_03566	0.66	+0.9
3,991,957	+		MIT1002_03566	0.71	-0.4
3,991,968	+		MIT1002_03566	0.73	+1.0
3,991,969	+		MIT1002_03566	0.73	-2.0
3,991,969	+		MIT1002_03566	0.73	-0.6
3,991,975	-		MIT1002_03566	0.74	+0.5
3,991,975	-		MIT1002_03566	0.74	-1.1
3,991,977	-		MIT1002_03566	0.74	+1.0
3,992,025	-		MIT1002_03566	0.80	+0.9
3,992,032	-		MIT1002_03566	0.81	+1.5
3,992,039	+		MIT1002_03566	0.82	-0.2
3,992,051	+		MIT1002_03566	0.83	+0.8
3,992,054	+		MIT1002_03566	0.84	+0.5
3,992,055	-		MIT1002_03566	0.84	+0.3
3,992,056	-		MIT1002_03566	0.84	+0.4
3,992,059	-		MIT1002_03566	0.84	+1.1
3,992,061	-		MIT1002_03566	0.84	+0.9
3,992,077	+		MIT1002_03566	0.86	-0.1
3,992,103	+		MIT1002_03566	0.90	+1.2
3,992,108	+				-0.7
3,992,139	+				+0.1
3,992,139	+				-0.8
3,992,139	+				-0.6
3,992,139	+				+0.8
3,992,139	+				-0.7
3,992,139	+				-0.0
3,992,139	+				-0.6
3,992,139	+				-0.2
3,992,139	+				+0.0
3,992,139	+				-0.3
3,992,139	+				-0.9
3,992,147	-				+1.9
3,992,147	-				+0.2
3,992,147	-				+0.2
3,992,147	-				-0.1
3,992,147	-				+0.1
3,992,147	-				+1.0
3,992,147	-				-0.2
3,992,147	-				+0.0
3,992,147	-				+0.5
3,992,147	-				+0.8
3,992,147	-				-0.6
3,992,147	-				-0.6
3,992,147	-				-0.3
3,992,147	-				+0.3
3,992,147	-				-0.1
3,992,147	-				-0.6
3,992,147	-				-0.3
3,992,147	-				-0.4
3,992,147	-				-0.5
3,992,147	-				-1.1
3,992,147	-				+0.4
3,992,147	-				-0.3
3,992,147	-				-0.3
3,992,158	+				+0.2
3,992,164	-				+0.1
3,992,238	-				+1.6
3,992,266	+				-0.2
3,992,276	+				+1.4
3,992,276	+				-1.1
3,992,276	+				-0.5
3,992,276	+				+0.4
3,992,276	+				-0.2
3,992,276	+				+0.1
3,992,276	+				+0.2
3,992,276	+				-1.1
3,992,276	+				+0.3
3,992,276	+				-1.1
3,992,276	+				+0.1
3,992,276	+				+0.8
3,992,276	+				-1.8
3,992,276	+				-1.9
3,992,276	+				-0.6
3,992,284	-				+0.5
3,992,284	-				-1.2
3,992,284	-				-0.6
3,992,284	-				+0.9
3,992,284	-				+0.1
3,992,284	-				-0.8
3,992,284	-				+1.2
3,992,284	-				-2.5
3,992,284	-				+0.1
3,992,284	-				-0.1
3,992,284	-				+0.1
3,992,286	+				+0.5
3,992,296	+				-0.3
3,992,317	+				-0.4
3,992,325	-				-2.3
3,992,329	+				+0.8
3,992,329	+				-3.7
3,992,329	+				+0.7
3,992,329	+				-0.3
3,992,336	-				+1.2
3,992,337	-				+0.3
3,992,407	+				-0.3
3,992,432	+				+1.1
3,992,437	-				-0.3
3,992,457	+				+0.5
3,992,511	+				-2.4
3,992,511	+				-0.6
3,992,511	+				-1.0
3,992,519	-				-1.1
3,992,634	+				-2.6
3,992,634	+				-1.0
3,992,642	-		MIT1002_03567	0.10	-0.6
3,992,703	+		MIT1002_03567	0.13	-1.2
3,992,761	+		MIT1002_03567	0.17	-1.4
3,993,017	+		MIT1002_03567	0.31	-3.1
3,993,022	+		MIT1002_03567	0.31	-1.9
3,993,030	-		MIT1002_03567	0.32	-2.3
3,993,073	+		MIT1002_03567	0.34	-1.3
3,993,127	-		MIT1002_03567	0.37	-0.3
3,993,149	+		MIT1002_03567	0.38	-0.9