Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01757

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 1
1,952,267	-				+0.8
1,952,267	-				+0.1
1,952,282	-		MIT1002_01756	0.14	+0.5
1,952,321	+		MIT1002_01756	0.28	+0.9
1,952,342	-		MIT1002_01756	0.36	-0.7
1,952,361	+		MIT1002_01756	0.43	+3.0
1,952,500	-				+0.2
1,952,543	+				-1.7
1,952,586	+				-1.0
1,952,697	+				-0.7
1,952,707	+				-0.8
1,952,707	+				-0.2
1,952,715	-				-0.2
1,952,717	+				+1.1
1,952,750	+				+0.2
1,952,904	-		MIT1002_01757	0.44	+0.1
1,952,930	-		MIT1002_01757	0.51	-0.5
1,952,934	+		MIT1002_01757	0.52	-0.4
1,952,942	-		MIT1002_01757	0.54	-0.6
1,952,968	-		MIT1002_01757	0.61	-0.1
1,952,998	+		MIT1002_01757	0.68	-0.1
1,953,082	-		MIT1002_01757	0.90	-0.2
1,953,176	-				-0.7
1,953,270	+				-1.6
1,953,270	+				+1.3
1,953,270	+				+0.1
1,953,278	-				+2.1
1,953,278	-				+1.0
1,953,294	+				-0.2
1,953,301	-				-0.1
1,953,301	-				+0.3
1,953,476	-		MIT1002_01758	0.21	-0.6
1,953,481	-		MIT1002_01758	0.22	+0.7
1,953,561	+		MIT1002_01758	0.30	+0.1
1,953,573	+		MIT1002_01758	0.32	-0.5
1,953,578	+		MIT1002_01758	0.32	-2.1
1,953,578	+		MIT1002_01758	0.32	+0.5
1,953,594	+		MIT1002_01758	0.34	+2.4
1,953,596	-		MIT1002_01758	0.34	-0.3
1,953,596	-		MIT1002_01758	0.34	-1.9
1,953,611	-		MIT1002_01758	0.36	+0.5
1,953,672	+		MIT1002_01758	0.43	+0.5
1,953,672	+		MIT1002_01758	0.43	-0.5
1,953,677	+		MIT1002_01758	0.43	-1.5
1,953,685	-		MIT1002_01758	0.44	-0.7
1,953,690	-		MIT1002_01758	0.45	-0.3
1,953,725	-		MIT1002_01758	0.49	-0.7
1,953,815	-		MIT1002_01758	0.59	+0.2
1,953,815	-		MIT1002_01758	0.59	-0.5
1,953,852	+		MIT1002_01758	0.63	+0.7
1,953,889	+		MIT1002_01758	0.67	+0.1
1,953,949	-		MIT1002_01758	0.73	-0.2
1,953,955	+		MIT1002_01758	0.74	-0.1
1,953,955	+		MIT1002_01758	0.74	-1.8
1,953,955	+		MIT1002_01758	0.74	-1.5
1,953,955	+		MIT1002_01758	0.74	-0.7
1,953,955	+		MIT1002_01758	0.74	-0.4
1,953,963	-		MIT1002_01758	0.75	+0.1
1,953,963	-		MIT1002_01758	0.75	+0.8
1,954,005	+		MIT1002_01758	0.80	+1.3
1,954,005	+		MIT1002_01758	0.80	-0.3
1,954,005	+		MIT1002_01758	0.80	-0.2
1,954,005	+		MIT1002_01758	0.80	-0.7
1,954,015	-		MIT1002_01758	0.81	+2.4
1,954,017	+		MIT1002_01758	0.81	-0.2
1,954,053	+		MIT1002_01758	0.85	+0.1