Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01537

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 1
1,689,574	+		MIT1002_01535	0.74	+0.6
1,689,576	+		MIT1002_01535	0.74	-3.3
1,689,599	+		MIT1002_01535	0.75	+0.4
1,689,645	+		MIT1002_01535	0.77	+0.2
1,689,650	+		MIT1002_01535	0.77	+0.3
1,689,658	-		MIT1002_01535	0.77	+2.2
1,689,702	+		MIT1002_01535	0.79	-1.0
1,689,710	-		MIT1002_01535	0.80	-1.2
1,689,715	+		MIT1002_01535	0.80	+0.4
1,689,850	-		MIT1002_01535	0.85	-0.6
1,689,928	+		MIT1002_01535	0.88	-0.0
1,689,936	-		MIT1002_01535	0.89	+0.5
1,689,946	-		MIT1002_01535	0.89	-1.6
1,690,018	-				+0.3
1,690,020	+				+0.9
1,690,025	-				-0.6
1,690,116	+				-0.1
1,690,124	-				+0.8
1,690,159	+				+0.6
1,690,167	-				-1.2
1,690,216	+				-4.3
1,690,253	-				-0.3
1,690,438	+				+0.1
1,690,516	+				-0.3
1,690,534	-				+0.2
1,690,648	+		MIT1002_01537	0.10	+0.7
1,690,890	-		MIT1002_01537	0.29	+0.7
1,690,892	+		MIT1002_01537	0.29	-0.2
1,690,989	+		MIT1002_01537	0.36	+0.2
1,691,046	-		MIT1002_01537	0.41	-1.7
1,691,115	+		MIT1002_01537	0.46	-0.9
1,691,128	-		MIT1002_01537	0.47	+0.3
1,691,222	+		MIT1002_01537	0.54	-0.4
1,691,251	-		MIT1002_01537	0.57	+0.1
1,691,279	-		MIT1002_01537	0.59	+0.0
1,691,290	-		MIT1002_01537	0.60	+0.1
1,691,316	+		MIT1002_01537	0.62	-1.7
1,691,350	+		MIT1002_01537	0.64	-1.2
1,691,350	+		MIT1002_01537	0.64	+0.3
1,691,358	-		MIT1002_01537	0.65	-1.4
1,691,390	+		MIT1002_01537	0.67	-3.3
1,691,418	+		MIT1002_01537	0.69	+1.0
1,691,418	+		MIT1002_01537	0.69	+0.2
1,691,454	+		MIT1002_01537	0.72	-1.4
1,691,470	-		MIT1002_01537	0.73	+0.5
1,691,620	+		MIT1002_01537	0.85	-0.9
1,691,640	+		MIT1002_01537	0.86	+0.9
1,691,645	+		MIT1002_01537	0.87	+0.4
1,691,677	-		MIT1002_01537	0.89	+0.4
1,691,677	-		MIT1002_01537	0.89	-1.9
1,691,710	-				+0.5
1,691,710	-				+0.5
1,691,716	-				+0.5
1,691,721	-				-0.7
1,691,722	+				-0.2
1,691,770	-				+0.9
1,691,796	+				-0.5
1,691,858	-				+0.0
1,691,875	-				-0.2
1,691,953	+				-0.5
1,691,953	+				+1.5