Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01455

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 1
1,605,360	+		MIT1002_01454	0.80	+1.1
1,605,364	+		MIT1002_01454	0.80	+0.6
1,605,368	-		MIT1002_01454	0.80	-0.3
1,605,443	+		MIT1002_01454	0.82	-0.2
1,605,496	+		MIT1002_01454	0.83	-0.2
1,605,540	-		MIT1002_01454	0.85	+1.9
1,605,558	+		MIT1002_01454	0.85	+0.2
1,605,692	+		MIT1002_01454	0.89	-0.8
1,605,700	-		MIT1002_01454	0.89	-0.4
1,605,707	-		MIT1002_01454	0.89	-0.4
1,605,777	+				-0.6
1,605,777	+				+0.4
1,605,785	-				-1.2
1,605,790	+				-1.0
1,605,850	+				+1.9
1,605,889	+				-0.1
1,605,897	-				-0.2
1,605,902	+				-0.3
1,605,910	-				-0.5
1,605,940	+				-0.5
1,605,940	-				+0.2
1,605,951	+				-0.1
1,605,951	+				+0.7
1,605,951	+				+0.2
1,605,951	+				+1.8
1,605,951	+				-0.6
1,605,951	+				-0.8
1,605,959	-				-0.7
1,605,959	-				-1.3
1,605,959	-				+0.1
1,605,959	-				-0.4
1,605,959	-				+0.0
1,605,959	-				+1.1
1,605,959	-				+1.2
1,605,961	+				-1.7
1,606,270	+				-1.1
1,606,395	+				+0.7
1,606,403	-				-0.2
1,606,404	-				-1.9
1,606,429	+		MIT1002_01455	0.12	-0.6
1,606,429	+		MIT1002_01455	0.12	-0.4
1,606,437	-		MIT1002_01455	0.12	-0.5
1,606,452	+		MIT1002_01455	0.14	+0.6
1,606,452	+		MIT1002_01455	0.14	-0.9
1,606,460	-		MIT1002_01455	0.15	+1.3
1,606,460	-		MIT1002_01455	0.15	-0.1
1,606,510	+		MIT1002_01455	0.21	+0.9
1,606,535	-		MIT1002_01455	0.23	+0.4
1,606,588	+		MIT1002_01455	0.29	-2.0
1,606,593	-		MIT1002_01455	0.30	-0.1
1,606,621	+		MIT1002_01455	0.33	+0.8
1,606,730	-		MIT1002_01455	0.45	-0.7
1,606,878	+		MIT1002_01455	0.61	-0.8
1,606,896	+		MIT1002_01455	0.63	-0.5
1,606,900	+		MIT1002_01455	0.64	+0.0
1,606,995	+		MIT1002_01455	0.74	+0.2
1,606,995	-		MIT1002_01455	0.74	-2.0
1,607,001	+		MIT1002_01455	0.75	+0.3
1,607,001	+		MIT1002_01455	0.75	-0.7
1,607,011	+		MIT1002_01455	0.76	+0.8
1,607,033	+		MIT1002_01455	0.78	+0.1
1,607,071	+		MIT1002_01455	0.82	+0.3
1,607,078	+		MIT1002_01455	0.83	-2.1
1,607,078	+		MIT1002_01455	0.83	+0.1
1,607,078	+		MIT1002_01455	0.83	-0.4
1,607,086	-		MIT1002_01455	0.84	-1.7
1,607,086	-		MIT1002_01455	0.84	+0.3
1,607,086	-		MIT1002_01455	0.84	-0.1
1,607,126	+		MIT1002_01455	0.89	+1.1
1,607,126	+		MIT1002_01455	0.89	+0.6
1,607,170	+				+1.1
1,607,170	+				+0.7
1,607,172	+				-0.1
1,607,261	-				+0.7
1,607,281	-				-0.1
1,607,341	-				-1.5
1,607,433	+				-0.5
1,608,046	+				-0.5