Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01249

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 1
1,374,491	-		MIT1002_01246	0.65	-2.6
1,374,494	+		MIT1002_01246	0.65	-1.3
1,374,517	+		MIT1002_01246	0.68	-0.3
1,374,530	-		MIT1002_01246	0.70	-2.3
1,374,532	+		MIT1002_01246	0.70	-0.8
1,374,566	+		MIT1002_01246	0.75	-0.0
1,374,574	-		MIT1002_01246	0.76	+0.9
1,374,588	+		MIT1002_01246	0.78	-0.3
1,374,588	+		MIT1002_01246	0.78	-1.1
1,374,588	+		MIT1002_01246	0.78	-0.6
1,374,588	+		MIT1002_01246	0.78	-1.7
1,374,588	+		MIT1002_01246	0.78	+1.0
1,374,588	+		MIT1002_01246	0.78	-0.1
1,374,588	+		MIT1002_01246	0.78	+1.5
1,374,588	+		MIT1002_01246	0.78	-1.4
1,374,596	-		MIT1002_01246	0.79	+0.5
1,374,596	-		MIT1002_01246	0.79	+0.4
1,374,596	-		MIT1002_01246	0.79	+0.3
1,374,596	-		MIT1002_01246	0.79	-2.8
1,374,596	-		MIT1002_01246	0.79	-0.2
1,374,604	-		MIT1002_01246	0.81	-0.7
1,374,611	+		MIT1002_01246	0.82	+0.0
1,374,632	+		MIT1002_01246	0.85	+0.2
1,374,636	+		MIT1002_01246	0.85	+0.4
1,374,689	-				-0.1
1,374,775	-				+0.5
1,374,813	-				-2.5
1,374,908	+				-1.4
1,374,908	+				+0.5
1,374,916	-				+0.8
1,374,931	+				-0.0
1,374,931	+				+0.4
1,374,931	+				-0.2
1,374,931	+				-0.2
1,374,931	+				+0.8
1,374,931	+				+1.9
1,374,931	+				+0.4
1,374,931	+				-1.1
1,374,939	-				-0.2
1,374,939	-				-0.7
1,374,939	-				-0.8
1,374,939	-				+0.2
1,374,939	-				+0.2
1,374,939	-				-2.1
1,374,939	-				+0.6
1,374,939	-				-0.3
1,374,939	-				+0.1
1,374,939	-				-1.7
1,374,949	-				+0.1
1,374,949	-				-0.6
1,374,995	-				+0.5
1,374,997	+				-0.3
1,375,092	+				-2.7
1,375,092	+				+0.1
1,375,099	+		MIT1002_01248	0.11	+0.2
1,375,099	+		MIT1002_01248	0.11	+0.7
1,375,100	-		MIT1002_01248	0.12	-0.6
1,375,102	-		MIT1002_01248	0.13	-0.3
1,375,290	+				+0.2
1,375,298	-				-0.8
1,375,300	+				-0.6
1,375,308	-				+0.6
1,375,327	-				+0.0
1,375,364	+				-0.4
1,375,369	+				-1.2
1,375,372	-				+0.6
1,375,488	-		MIT1002_01249	0.18	-1.1
1,375,579	-		MIT1002_01249	0.68	+0.2
1,375,597	-		MIT1002_01249	0.78	-0.5
1,375,673	+				+0.9
1,375,689	+				-0.4
1,375,734	+				-0.8
1,375,739	+				-0.0
1,375,739	+				-0.1
1,375,762	+				-0.5
1,375,777	+				+1.2
1,375,777	+				+0.2
1,375,777	+				-0.3
1,375,777	+				+0.3
1,375,777	+				-0.3
1,375,785	-				-0.2
1,375,785	-				+1.6
1,375,872	+				+0.3
1,375,908	-				-0.1
1,375,908	-				-0.9
1,375,954	-				+0.7
1,375,991	-		MIT1002_01250	0.11	-0.4
1,376,064	+		MIT1002_01250	0.16	-0.2
1,376,064	+		MIT1002_01250	0.16	-0.4
1,376,071	+		MIT1002_01250	0.17	-0.2
1,376,173	-		MIT1002_01250	0.24	-0.4
1,376,222	-		MIT1002_01250	0.28	+0.4
1,376,234	-		MIT1002_01250	0.28	+0.6
1,376,271	+		MIT1002_01250	0.31	+1.2
1,376,283	+		MIT1002_01250	0.32	+0.4
1,376,358	-		MIT1002_01250	0.37	+1.0
1,376,358	-		MIT1002_01250	0.37	+0.5
1,376,383	+		MIT1002_01250	0.39	+1.3
1,376,385	+		MIT1002_01250	0.39	-0.6
1,376,549	+		MIT1002_01250	0.51	-0.1
1,376,602	-		MIT1002_01250	0.54	-0.1
1,376,610	-		MIT1002_01250	0.55	-0.4