Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS29570

Experiment: Psabiae_ML3b with MT81

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Psabiae_ML3b with MT81
6,561,933	+		QEN71_RS29565	0.54	+0.2
6,561,933	+		QEN71_RS29565	0.54	-0.1
6,561,933	+		QEN71_RS29565	0.54	+0.4
6,561,933	+		QEN71_RS29565	0.54	+0.3
6,561,933	+		QEN71_RS29565	0.54	+0.4
6,561,933	+		QEN71_RS29565	0.54	+0.6
6,561,934	-		QEN71_RS29565	0.54	+0.1
6,561,934	-		QEN71_RS29565	0.54	+0.2
6,561,934	-		QEN71_RS29565	0.54	+0.1
6,561,934	-		QEN71_RS29565	0.54	+0.8
6,561,934	-		QEN71_RS29565	0.54	-0.2
6,562,029	+		QEN71_RS29565	0.66	-0.4
6,562,029	+		QEN71_RS29565	0.66	+1.1
6,562,029	+		QEN71_RS29565	0.66	-0.2
6,562,029	+		QEN71_RS29565	0.66	-0.1
6,562,029	+		QEN71_RS29565	0.66	+0.2
6,562,029	+		QEN71_RS29565	0.66	+0.0
6,562,029	+		QEN71_RS29565	0.66	-0.2
6,562,029	+		QEN71_RS29565	0.66	+0.7
6,562,029	+		QEN71_RS29565	0.66	+0.1
6,562,070	-		QEN71_RS29565	0.71	-0.2
6,562,235	+				+0.1
6,562,236	-				-0.2
6,562,236	-				-0.1
6,562,236	-				+0.5
6,562,236	-				+0.2
6,562,244	+				-0.1
6,562,244	+				-0.4
6,562,245	-				-0.9
6,562,375	+				-0.3
6,562,375	+				+0.1
6,562,375	+				-0.5
6,562,376	-				+0.2
6,562,376	-				-0.1
6,562,376	-				+0.1
6,562,376	-				-0.9
6,562,623	+		QEN71_RS29570	0.14	+1.7
6,562,644	+		QEN71_RS29570	0.16	+0.8
6,562,644	+		QEN71_RS29570	0.16	-0.7
6,562,644	+		QEN71_RS29570	0.16	-0.7
6,562,644	+		QEN71_RS29570	0.16	-0.4
6,562,644	+		QEN71_RS29570	0.16	-0.6
6,562,644	+		QEN71_RS29570	0.16	+0.1
6,562,644	+		QEN71_RS29570	0.16	+0.6
6,562,644	+		QEN71_RS29570	0.16	+0.8
6,562,644	+		QEN71_RS29570	0.16	-0.3
6,562,644	+		QEN71_RS29570	0.16	-0.4
6,562,644	+		QEN71_RS29570	0.16	+0.8
6,562,645	-		QEN71_RS29570	0.16	-0.9
6,562,645	-		QEN71_RS29570	0.16	-0.4
6,562,645	-		QEN71_RS29570	0.16	-0.2
6,562,645	-		QEN71_RS29570	0.16	+0.5
6,562,645	-		QEN71_RS29570	0.16	-2.1
6,562,803	+		QEN71_RS29570	0.26	+1.7
6,563,266	-		QEN71_RS29570	0.54	-0.5
6,563,299	-		QEN71_RS29570	0.56	-0.8
6,563,358	+		QEN71_RS29570	0.60	-0.9
6,563,358	+		QEN71_RS29570	0.60	-0.5
6,563,358	+		QEN71_RS29570	0.60	+0.1
6,563,358	+		QEN71_RS29570	0.60	-0.6
6,563,358	+		QEN71_RS29570	0.60	-1.2
6,563,359	-		QEN71_RS29570	0.60	-0.8
6,563,359	-		QEN71_RS29570	0.60	-1.5
6,563,359	-		QEN71_RS29570	0.60	-1.2
6,563,359	-		QEN71_RS29570	0.60	+0.0
6,563,359	-		QEN71_RS29570	0.60	+0.4
6,563,359	-		QEN71_RS29570	0.60	+0.4
6,563,359	-		QEN71_RS29570	0.60	-0.5
6,563,505	+		QEN71_RS29570	0.69	+0.1
6,563,505	+		QEN71_RS29570	0.69	-1.1
6,563,505	+		QEN71_RS29570	0.69	-1.0
6,563,505	+		QEN71_RS29570	0.69	+0.2
6,563,505	+		QEN71_RS29570	0.69	-0.3
6,563,505	+		QEN71_RS29570	0.69	+0.0
6,563,506	-		QEN71_RS29570	0.69	-0.5
6,563,506	-		QEN71_RS29570	0.69	+0.8
6,563,506	-		QEN71_RS29570	0.69	-0.3
6,563,506	-		QEN71_RS29570	0.69	-0.8
6,563,506	-		QEN71_RS29570	0.69	-0.8
6,563,506	-		QEN71_RS29570	0.69	-1.4
6,563,506	-		QEN71_RS29570	0.69	-1.8
6,563,506	-		QEN71_RS29570	0.69	-0.4
6,563,506	-		QEN71_RS29570	0.69	-0.4
6,563,506	-		QEN71_RS29570	0.69	-1.1
6,563,506	-		QEN71_RS29570	0.69	-1.9
6,563,506	-		QEN71_RS29570	0.69	+0.1
6,563,506	-		QEN71_RS29570	0.69	-0.5
6,563,640	+		QEN71_RS29570	0.78	+0.1
6,563,641	-		QEN71_RS29570	0.78	+0.9
6,563,760	+		QEN71_RS29570	0.85	-1.2
6,563,760	+		QEN71_RS29570	0.85	-1.2
6,563,760	+		QEN71_RS29570	0.85	+0.8
6,563,760	+		QEN71_RS29570	0.85	+0.6
6,563,760	+		QEN71_RS29570	0.85	-0.2
6,563,761	-		QEN71_RS29570	0.85	+0.1
6,563,761	-		QEN71_RS29570	0.85	-1.9
6,563,761	-		QEN71_RS29570	0.85	+0.4
6,563,761	-		QEN71_RS29570	0.85	+1.7
6,563,761	-		QEN71_RS29570	0.85	+1.0
6,563,761	-		QEN71_RS29570	0.85	+0.2
6,563,761	-		QEN71_RS29570	0.85	-0.2
6,563,761	-		QEN71_RS29570	0.85	+1.6
6,563,835	+				+1.4
6,563,835	+				+0.1
6,563,835	+				-0.4
6,563,835	+				-0.5
6,563,835	+				-2.2
6,563,835	+				+1.8
6,563,835	+				+0.5
6,563,835	+				-1.0
6,563,835	+				+0.2
6,563,836	-				-1.5
6,563,836	-				-0.0
6,563,836	-				-0.5
6,563,836	-				+0.2
6,563,836	-				-0.0
6,563,836	-				-0.1
6,563,836	-				+1.7
6,563,868	+				+0.2
6,563,868	+				-0.6
6,563,868	+				+0.0
6,563,868	+				+1.1
6,563,869	-				-0.5
6,563,869	-				+0.2
6,564,095	+				-0.4
6,564,095	+				-1.1
6,564,095	+				+0.2
6,564,095	+				+1.1
6,564,095	+				+0.5
6,564,095	+				-0.1
6,564,096	-				-1.0
6,564,096	-				-0.9
6,564,096	-				-0.2
6,564,096	-				-0.2
6,564,096	-				-1.4
6,564,096	-				+0.1
6,564,096	-				-0.2
6,564,131	+				-1.1
6,564,131	+				-1.0
6,564,131	+				-0.2
6,564,131	+				+0.1
6,564,131	+				-1.5
6,564,131	+				-1.3
6,564,132	-				+0.8
6,564,132	-				-0.9
6,564,132	-				-0.4
6,564,132	-				-0.3
6,564,132	-				-1.6
6,564,132	-				-0.8
6,564,132	-				+1.1
6,564,188	+				-0.2
6,564,189	-				+0.3
6,564,189	-				+0.1
6,564,189	-				+0.8
6,564,189	-				+0.4
6,564,189	-				-0.4
6,564,554	+		QEN71_RS29575	0.72	-1.7
6,564,555	-		QEN71_RS29575	0.72	-0.4
6,564,555	-		QEN71_RS29575	0.72	-0.3
6,564,555	-		QEN71_RS29575	0.72	-2.0
6,564,612	+		QEN71_RS29575	0.87	-0.7
6,564,612	+		QEN71_RS29575	0.87	+0.4
6,564,612	+		QEN71_RS29575	0.87	-0.8
6,564,650	+				+0.6
6,564,651	-				+0.0
6,564,687	+				+0.3
6,564,687	+				+1.6
6,564,688	-				-0.1
6,564,738	+				-0.5
6,564,739	-				-0.7
6,564,739	-				-0.5
6,564,756	-				+0.2
6,564,756	-				-0.3
6,564,758	+				+2.1
6,564,758	+				+0.2
6,564,785	+				-0.3
6,564,785	+				-0.4
6,564,785	+				-2.0
6,564,785	+				+0.9
6,564,785	+				-0.6
6,564,785	+				+0.2
6,564,786	-				-0.9
6,564,786	-				+0.5
6,564,786	-				-1.2
6,564,786	-				-0.6
6,564,786	-				-0.9
6,564,786	-				-0.2
6,564,786	-				-0.1
6,564,786	-				-0.1
6,564,786	-				+0.4
6,564,786	-				-0.6
6,564,786	-				-0.1
6,564,820	+				+0.1
6,564,820	+				-0.3
6,564,821	-				+0.6
6,564,821	-				-0.6
6,564,853	+				-0.5
6,564,853	+				+0.2
6,564,853	+				-0.8
6,564,853	+				+0.5
6,564,853	+				+0.1
6,564,853	+				-0.1
6,564,853	+				-0.4
6,564,854	-				-0.3
6,564,854	-				+1.2
6,564,854	-				+0.5
6,564,854	-				-0.6
6,564,883	+				+0.7
6,564,884	-				+0.3
6,564,884	-				+0.0
6,564,884	-				-0.7
6,564,923	+				-1.6
6,564,923	+				+1.1
6,564,924	-				+0.2
6,564,924	-				-1.2
6,564,962	+		QEN71_RS29580	0.12	+0.7
6,564,962	+		QEN71_RS29580	0.12	+0.0
6,564,962	+		QEN71_RS29580	0.12	-0.7
6,564,963	-		QEN71_RS29580	0.12	-0.2
6,564,963	-		QEN71_RS29580	0.12	+0.5
6,564,965	+		QEN71_RS29580	0.13	-0.5
6,564,965	+		QEN71_RS29580	0.13	+0.5
6,564,965	+		QEN71_RS29580	0.13	-0.6
6,564,965	+		QEN71_RS29580	0.13	+0.1
6,564,966	-		QEN71_RS29580	0.13	-1.1
6,564,966	-		QEN71_RS29580	0.13	+0.2
6,564,966	-		QEN71_RS29580	0.13	+0.0
6,564,966	-		QEN71_RS29580	0.13	-0.9
6,564,966	-		QEN71_RS29580	0.13	-0.1
6,564,966	-		QEN71_RS29580	0.13	+0.9