Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13830

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
3,049,167	+		LRK53_RS13820	0.59	+0.8
3,049,167	+		LRK53_RS13820	0.59	+0.7
3,049,167	+		LRK53_RS13820	0.59	+0.8
3,049,167	+		LRK53_RS13820	0.59	-1.3
3,049,167	+		LRK53_RS13820	0.59	-1.8
3,049,167	+		LRK53_RS13820	0.59	+0.2
3,049,167	+		LRK53_RS13820	0.59	-0.7
3,049,167	+		LRK53_RS13820	0.59	+1.6
3,049,167	+		LRK53_RS13820	0.59	-2.1
3,049,168	-		LRK53_RS13820	0.59	-1.3
3,049,168	-		LRK53_RS13820	0.59	-0.8
3,049,168	-		LRK53_RS13820	0.59	-4.3
3,049,168	-		LRK53_RS13820	0.59	-0.2
3,049,168	-		LRK53_RS13820	0.59	-0.4
3,049,168	-		LRK53_RS13820	0.59	-2.6
3,049,168	-		LRK53_RS13820	0.59	-2.0
3,049,168	-		LRK53_RS13820	0.59	-0.9
3,049,168	-		LRK53_RS13820	0.59	+0.3
3,049,168	-		LRK53_RS13820	0.59	-1.0
3,049,168	-		LRK53_RS13820	0.59	-1.3
3,049,168	-		LRK53_RS13820	0.59	-1.3
3,049,168	-		LRK53_RS13820	0.59	-0.3
3,049,168	-		LRK53_RS13820	0.59	-0.9
3,049,168	-		LRK53_RS13820	0.59	+1.8
3,049,168	-		LRK53_RS13820	0.59	+0.2
3,049,168	-		LRK53_RS13820	0.59	-0.5
3,049,232	+		LRK53_RS13820	0.90	-1.1
3,049,232	+		LRK53_RS13820	0.90	-1.0
3,049,232	+		LRK53_RS13820	0.90	-0.3
3,049,232	+		LRK53_RS13820	0.90	-0.5
3,049,232	+		LRK53_RS13820	0.90	-2.4
3,049,232	+		LRK53_RS13820	0.90	-3.3
3,049,232	+		LRK53_RS13820	0.90	-2.7
3,049,236	+				-1.9
3,049,236	+				-0.7
3,049,236	+				-1.8
3,049,236	+				-3.0
3,049,236	+				-1.3
3,049,236	+				-2.4
3,049,236	+				-1.3
3,049,236	+				-0.9
3,049,236	+				-1.9
3,049,236	+				+1.2
3,049,236	+				-0.9
3,049,236	+				-1.5
3,049,236	+				-0.6
3,049,236	+				-1.3
3,049,236	+				-1.7
3,049,236	+				-1.7
3,049,236	+				-1.6
3,049,236	+				-0.9
3,049,236	+				-0.2
3,049,236	+				-0.9
3,049,236	+				-0.6
3,049,236	+				-0.4
3,049,236	+				-0.3
3,049,236	+				-0.6
3,049,236	+				-0.9
3,049,269	+				-1.3
3,049,270	-				-1.9
3,049,311	+				+0.5
3,049,311	+				-1.8
3,049,312	-				-0.5
3,049,312	-				-1.0
3,049,312	-				+3.0
3,049,312	-				-1.0
3,049,312	-				+2.8
3,049,312	-				-2.0
3,049,358	+				+0.0
3,049,373	+				+0.9
3,049,373	+				+1.1
3,049,373	+				-1.7
3,049,373	+				+0.2
3,049,373	+				-0.5
3,049,374	-				-0.8
3,049,374	-				-0.2
3,049,374	-				-0.2
3,049,723	+				-1.1
3,049,723	+				-0.6
3,049,723	+				-2.3
3,049,723	+				+0.4
3,049,723	+				+0.4
3,049,723	+				-2.5
3,049,723	+				+0.0
3,049,723	+				+0.8
3,049,723	+				+0.5
3,049,723	+				-1.2
3,049,723	+				-1.4
3,049,724	-				-0.3
3,049,724	-				-1.6
3,049,724	-				+0.5
3,049,724	-				-1.0
3,049,724	-				+1.2
3,049,724	-				-0.3
3,049,724	-				-2.1
3,049,741	+				-0.8
3,049,742	-				+0.0
3,049,742	-				-0.5
3,049,742	-				+0.8
3,049,742	-				-0.3
3,049,742	-				-0.3
3,049,883	+				-1.4
3,049,884	-				-1.3
3,049,884	-				+0.8
3,049,884	-				-1.1
3,049,884	-				-1.3
3,049,977	+				-0.2
3,049,977	+				-2.5
3,049,977	+				-1.7
3,049,977	+				-2.2
3,049,977	+				+0.5
3,049,977	+				+1.0
3,049,977	+				+0.0
3,049,978	-				-1.4
3,049,978	-				-1.3
3,049,978	-				-2.1
3,049,978	-				-1.6
3,049,978	-				-1.3
3,049,978	-				+1.8
3,049,978	-				-1.6
3,050,083	+				-2.5
3,050,083	+				-0.6
3,050,084	-				+0.1
3,050,084	-				-0.3
3,050,286	+		LRK53_RS13830	0.52	-1.2
3,050,286	+		LRK53_RS13830	0.52	+1.2
3,050,286	+		LRK53_RS13830	0.52	+1.2
3,050,287	-		LRK53_RS13830	0.52	-3.3
3,050,287	-		LRK53_RS13830	0.52	-0.6
3,050,298	+		LRK53_RS13830	0.54	-0.5
3,050,298	+		LRK53_RS13830	0.54	+0.0
3,050,298	+		LRK53_RS13830	0.54	-0.9
3,050,298	+		LRK53_RS13830	0.54	-0.2
3,050,298	+		LRK53_RS13830	0.54	-2.6
3,050,298	+		LRK53_RS13830	0.54	-1.2
3,050,298	+		LRK53_RS13830	0.54	-1.0
3,050,299	-		LRK53_RS13830	0.54	-1.3
3,050,299	-		LRK53_RS13830	0.54	+1.0
3,050,299	-		LRK53_RS13830	0.54	-1.3
3,050,299	-		LRK53_RS13830	0.54	-0.5
3,050,299	-		LRK53_RS13830	0.54	-1.3
3,050,299	-		LRK53_RS13830	0.54	+0.0
3,050,299	-		LRK53_RS13830	0.54	-3.8
3,050,372	+		LRK53_RS13830	0.70	-0.9
3,050,372	+		LRK53_RS13830	0.70	-1.1
3,050,373	-		LRK53_RS13830	0.70	+0.2
3,050,373	-		LRK53_RS13830	0.70	-1.0
3,050,511	+				-3.1
3,050,511	+				-2.9
3,050,511	+				-2.0
3,050,511	+				-0.6
3,050,511	+				-0.8
3,050,511	+				-0.0
3,050,511	+				-1.3
3,050,511	+				-1.5
3,050,511	+				+0.4
3,050,511	+				-1.0
3,050,511	+				-0.8
3,050,512	-				-2.6
3,050,512	-				-0.9
3,050,512	-				-0.3
3,050,512	-				-0.7
3,050,512	-				-1.1
3,050,811	+		LRK53_RS13835	0.21	-1.1
3,050,812	-		LRK53_RS13835	0.21	+1.4
3,050,812	-		LRK53_RS13835	0.21	-1.1
3,050,812	-		LRK53_RS13835	0.21	+0.2
3,050,812	-		LRK53_RS13835	0.21	-0.6
3,050,841	+		LRK53_RS13835	0.23	+0.2
3,050,841	+		LRK53_RS13835	0.23	-0.2
3,050,841	+		LRK53_RS13835	0.23	-1.2
3,050,841	+		LRK53_RS13835	0.23	-0.9
3,050,841	+		LRK53_RS13835	0.23	-2.6
3,050,841	+		LRK53_RS13835	0.23	-1.3
3,050,841	+		LRK53_RS13835	0.23	-0.9
3,050,841	+		LRK53_RS13835	0.23	-0.6
3,050,842	-		LRK53_RS13835	0.23	-0.6
3,050,842	-		LRK53_RS13835	0.23	-2.3
3,050,842	-		LRK53_RS13835	0.23	-0.6
3,050,842	-		LRK53_RS13835	0.23	-0.3
3,050,842	-		LRK53_RS13835	0.23	-0.6
3,050,842	-		LRK53_RS13835	0.23	-0.2
3,050,842	-		LRK53_RS13835	0.23	+2.1
3,050,856	+		LRK53_RS13835	0.25	-1.6
3,050,857	-		LRK53_RS13835	0.25	+0.1
3,050,857	-		LRK53_RS13835	0.25	-0.7
3,050,857	-		LRK53_RS13835	0.25	+1.6
3,050,857	-		LRK53_RS13835	0.25	-0.6
3,050,857	-		LRK53_RS13835	0.25	-0.8
3,050,857	-		LRK53_RS13835	0.25	-1.3
3,050,857	-		LRK53_RS13835	0.25	-0.6
3,050,897	+		LRK53_RS13835	0.28	-0.3
3,050,897	+		LRK53_RS13835	0.28	-2.4
3,050,898	-		LRK53_RS13835	0.28	-1.7
3,050,929	+		LRK53_RS13835	0.31	+0.5
3,050,929	+		LRK53_RS13835	0.31	+0.4
3,050,929	+		LRK53_RS13835	0.31	+0.5
3,050,930	-		LRK53_RS13835	0.31	-1.6
3,050,930	-		LRK53_RS13835	0.31	+1.3
3,050,994	+		LRK53_RS13835	0.36	-0.6
3,050,994	+		LRK53_RS13835	0.36	-0.2
3,050,994	+		LRK53_RS13835	0.36	-2.1
3,050,994	+		LRK53_RS13835	0.36	-0.2
3,050,994	+		LRK53_RS13835	0.36	-1.9
3,050,995	-		LRK53_RS13835	0.36	-1.0
3,050,995	-		LRK53_RS13835	0.36	-0.6
3,050,995	-		LRK53_RS13835	0.36	-1.3
3,050,995	-		LRK53_RS13835	0.36	-2.0
3,050,995	-		LRK53_RS13835	0.36	-1.3
3,051,096	+		LRK53_RS13835	0.44	+0.4
3,051,097	-		LRK53_RS13835	0.44	+1.7
3,051,097	-		LRK53_RS13835	0.44	-1.4
3,051,240	+		LRK53_RS13835	0.56	-0.5
3,051,240	+		LRK53_RS13835	0.56	-0.7
3,051,240	+		LRK53_RS13835	0.56	-0.3
3,051,240	+		LRK53_RS13835	0.56	-0.4
3,051,241	-		LRK53_RS13835	0.56	-1.6
3,051,241	-		LRK53_RS13835	0.56	-0.8
3,051,241	-		LRK53_RS13835	0.56	-1.5
3,051,241	-		LRK53_RS13835	0.56	-0.8