Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04700

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
1,093,391	-		LRK53_RS04695	0.12	+0.2
1,093,391	-		LRK53_RS04695	0.12	-0.4
1,093,391	-		LRK53_RS04695	0.12	-0.4
1,093,391	-		LRK53_RS04695	0.12	-0.4
1,093,391	-		LRK53_RS04695	0.12	-0.0
1,093,423	+		LRK53_RS04695	0.15	-0.9
1,093,423	+		LRK53_RS04695	0.15	-2.7
1,093,423	+		LRK53_RS04695	0.15	-1.0
1,093,423	+		LRK53_RS04695	0.15	-1.3
1,093,423	+		LRK53_RS04695	0.15	-1.8
1,093,423	+		LRK53_RS04695	0.15	+0.1
1,093,423	+		LRK53_RS04695	0.15	-0.7
1,093,423	+		LRK53_RS04695	0.15	-2.0
1,093,424	-		LRK53_RS04695	0.15	+0.4
1,093,424	-		LRK53_RS04695	0.15	-0.1
1,093,424	-		LRK53_RS04695	0.15	-0.2
1,093,715	-		LRK53_RS04695	0.44	-1.0
1,093,915	+		LRK53_RS04695	0.63	-1.5
1,093,915	+		LRK53_RS04695	0.63	-1.5
1,093,915	+		LRK53_RS04695	0.63	-0.8
1,093,916	-		LRK53_RS04695	0.63	-0.4
1,093,916	-		LRK53_RS04695	0.63	-0.4
1,093,999	+		LRK53_RS04695	0.72	+1.5
1,093,999	+		LRK53_RS04695	0.72	-0.5
1,093,999	+		LRK53_RS04695	0.72	-1.5
1,094,222	-				-0.0
1,094,399	+				-0.0
1,094,478	+				-0.2
1,094,478	+				-0.8
1,094,478	+				-2.1
1,094,478	+				+0.2
1,094,478	+				-0.2
1,094,478	+				-0.8
1,094,479	-				+0.2
1,094,479	-				-0.7
1,094,479	-				+1.2
1,094,479	-				-0.4
1,094,479	-				-0.1
1,094,479	-				+0.1
1,094,479	-				-1.5
1,094,479	-				-0.7
1,094,479	-				+3.8
1,094,479	-				+0.2
1,094,511	+		LRK53_RS04700	0.12	+0.6
1,094,512	-		LRK53_RS04700	0.12	+0.3
1,094,512	-		LRK53_RS04700	0.12	-1.1
1,094,512	-		LRK53_RS04700	0.12	+0.1
1,094,518	-		LRK53_RS04700	0.12	+0.9
1,094,518	-		LRK53_RS04700	0.12	-2.0
1,094,830	+		LRK53_RS04700	0.38	-0.0
1,094,830	+		LRK53_RS04700	0.38	-1.0
1,094,830	+		LRK53_RS04700	0.38	-1.1
1,094,831	-		LRK53_RS04700	0.38	-0.8
1,094,973	+		LRK53_RS04700	0.50	+1.2
1,094,973	+		LRK53_RS04700	0.50	-0.3
1,094,973	+		LRK53_RS04700	0.50	-1.7
1,094,973	+		LRK53_RS04700	0.50	+0.7
1,094,973	+		LRK53_RS04700	0.50	+2.1
1,094,973	+		LRK53_RS04700	0.50	-1.3
1,094,973	+		LRK53_RS04700	0.50	-0.8
1,094,973	+		LRK53_RS04700	0.50	+0.2
1,094,973	+		LRK53_RS04700	0.50	+0.2
1,094,974	-		LRK53_RS04700	0.50	-0.4
1,094,974	-		LRK53_RS04700	0.50	-0.6
1,094,974	-		LRK53_RS04700	0.50	-0.7
1,094,974	-		LRK53_RS04700	0.50	-2.5
1,095,093	+		LRK53_RS04700	0.60	-0.9
1,095,093	+		LRK53_RS04700	0.60	-0.9
1,095,093	+		LRK53_RS04700	0.60	-0.6
1,095,093	+		LRK53_RS04700	0.60	+0.3
1,095,093	+		LRK53_RS04700	0.60	-0.3
1,095,093	+		LRK53_RS04700	0.60	-0.7
1,095,093	+		LRK53_RS04700	0.60	+0.2
1,095,093	+		LRK53_RS04700	0.60	-0.9
1,095,093	+		LRK53_RS04700	0.60	-1.2
1,095,093	+		LRK53_RS04700	0.60	-1.0
1,095,093	+		LRK53_RS04700	0.60	-0.7
1,095,093	+		LRK53_RS04700	0.60	-0.0
1,095,094	-		LRK53_RS04700	0.60	-1.2
1,095,094	-		LRK53_RS04700	0.60	-0.8
1,095,094	-		LRK53_RS04700	0.60	+0.5
1,095,094	-		LRK53_RS04700	0.60	-1.1
1,095,094	-		LRK53_RS04700	0.60	-0.0
1,095,094	-		LRK53_RS04700	0.60	-0.7
1,095,094	-		LRK53_RS04700	0.60	-0.4
1,095,094	-		LRK53_RS04700	0.60	-0.7
1,095,094	-		LRK53_RS04700	0.60	+0.7
1,095,204	+		LRK53_RS04700	0.70	-2.3
1,095,204	+		LRK53_RS04700	0.70	-0.2
1,095,204	+		LRK53_RS04700	0.70	-2.0
1,095,204	+		LRK53_RS04700	0.70	+0.5
1,095,204	+		LRK53_RS04700	0.70	+0.3
1,095,204	+		LRK53_RS04700	0.70	-0.4
1,095,204	+		LRK53_RS04700	0.70	-1.2
1,095,204	+		LRK53_RS04700	0.70	+1.9
1,095,204	+		LRK53_RS04700	0.70	+1.5
1,095,204	+		LRK53_RS04700	0.70	+0.7
1,095,204	+		LRK53_RS04700	0.70	-0.7
1,095,204	+		LRK53_RS04700	0.70	-0.0
1,095,204	+		LRK53_RS04700	0.70	-0.8
1,095,204	+		LRK53_RS04700	0.70	-0.1
1,095,204	+		LRK53_RS04700	0.70	+2.4
1,095,204	+		LRK53_RS04700	0.70	-0.8
1,095,204	+		LRK53_RS04700	0.70	-0.8
1,095,204	+		LRK53_RS04700	0.70	+0.9
1,095,204	+		LRK53_RS04700	0.70	-1.6
1,095,204	+		LRK53_RS04700	0.70	-1.6
1,095,204	+		LRK53_RS04700	0.70	-0.9
1,095,204	+		LRK53_RS04700	0.70	+1.3
1,095,205	-		LRK53_RS04700	0.70	-0.0
1,095,205	-		LRK53_RS04700	0.70	-2.1
1,095,205	-		LRK53_RS04700	0.70	+2.4
1,095,205	-		LRK53_RS04700	0.70	-0.4
1,095,205	-		LRK53_RS04700	0.70	+0.2
1,095,205	-		LRK53_RS04700	0.70	-0.1
1,095,205	-		LRK53_RS04700	0.70	+1.2
1,095,205	-		LRK53_RS04700	0.70	-0.5
1,095,205	-		LRK53_RS04700	0.70	-0.6
1,095,205	-		LRK53_RS04700	0.70	-1.9
1,095,205	-		LRK53_RS04700	0.70	+0.4
1,095,205	-		LRK53_RS04700	0.70	-1.6
1,095,205	-		LRK53_RS04700	0.70	+0.5
1,095,205	-		LRK53_RS04700	0.70	+0.2
1,095,205	-		LRK53_RS04700	0.70	-0.7
1,095,205	-		LRK53_RS04700	0.70	-1.1
1,095,208	-		LRK53_RS04700	0.70	-0.1
1,095,336	+		LRK53_RS04700	0.81	+0.0
1,095,337	-		LRK53_RS04700	0.81	-1.1
1,095,337	-		LRK53_RS04700	0.81	-0.0
1,095,337	-		LRK53_RS04700	0.81	-0.7
1,096,072	+		LRK53_RS04705	0.47	-0.5
1,096,072	+		LRK53_RS04705	0.47	+0.8
1,096,072	+		LRK53_RS04705	0.47	-3.4
1,096,073	-		LRK53_RS04705	0.47	-1.3
1,096,073	-		LRK53_RS04705	0.47	-0.3
1,096,073	-		LRK53_RS04705	0.47	+1.2
1,096,073	-		LRK53_RS04705	0.47	+0.4
1,096,073	-		LRK53_RS04705	0.47	-1.0
1,096,142	+		LRK53_RS04705	0.53	-0.9
1,096,142	+		LRK53_RS04705	0.53	-0.0
1,096,196	+		LRK53_RS04705	0.58	-1.1
1,096,196	+		LRK53_RS04705	0.58	-1.1
1,096,197	-		LRK53_RS04705	0.59	-1.8
1,096,197	-		LRK53_RS04705	0.59	-1.5
1,096,197	-		LRK53_RS04705	0.59	-0.0
1,096,197	-		LRK53_RS04705	0.59	-1.2
1,096,199	-		LRK53_RS04705	0.59	-0.4
1,096,199	-		LRK53_RS04705	0.59	-0.1
1,096,380	+		LRK53_RS04705	0.75	-1.7
1,096,380	+		LRK53_RS04705	0.75	-0.9
1,096,380	+		LRK53_RS04705	0.75	+2.4
1,096,380	+		LRK53_RS04705	0.75	-0.7
1,096,380	+		LRK53_RS04705	0.75	-0.5
1,096,380	+		LRK53_RS04705	0.75	+0.2
1,096,381	-		LRK53_RS04705	0.76	-1.7
1,096,381	-		LRK53_RS04705	0.76	-1.5
1,096,381	-		LRK53_RS04705	0.76	-0.7
1,096,381	-		LRK53_RS04705	0.76	-0.1
1,096,381	-		LRK53_RS04705	0.76	-1.4
1,096,514	+		LRK53_RS04705	0.88	+0.2
1,096,515	-		LRK53_RS04705	0.88	+1.6
1,096,515	-		LRK53_RS04705	0.88	-1.6