Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03937

Experiment: monoculture; Experiment C, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 6
4,420,822	-				+1.7
4,420,892	-				+0.8
4,420,892	-				+1.7
4,420,985	+				-2.0
4,420,993	-				-1.0
4,420,995	+				-0.2
4,421,056	-				+0.4
4,421,060	+				+0.8
4,421,067	+				+0.3
4,421,067	+				-0.6
4,421,075	-		MIT1002_03937	0.11	-2.6
4,421,075	-		MIT1002_03937	0.11	-1.0
4,421,077	+		MIT1002_03937	0.11	+0.1
4,421,083	-		MIT1002_03937	0.12	-0.1
4,421,097	-		MIT1002_03937	0.15	-1.0
4,421,110	+		MIT1002_03937	0.18	-2.3
4,421,136	+		MIT1002_03937	0.22	-0.0
4,421,136	+		MIT1002_03937	0.22	+1.6
4,421,201	-		MIT1002_03937	0.35	+0.5
4,421,213	-		MIT1002_03937	0.37	+0.4
4,421,233	-		MIT1002_03937	0.41	-0.5
4,421,322	-		MIT1002_03937	0.58	-1.4
4,421,387	+		MIT1002_03937	0.70	-1.3
4,421,393	-		MIT1002_03937	0.71	-0.8
4,421,443	+		MIT1002_03937	0.81	+0.6
4,421,474	+		MIT1002_03937	0.87	-2.0
4,421,482	-		MIT1002_03937	0.88	-0.0
4,421,482	-		MIT1002_03937	0.88	-0.4
4,421,482	-		MIT1002_03937	0.88	-0.9
4,421,487	-		MIT1002_03937	0.89	-0.6
4,421,498	+				+0.3
4,421,573	+				-0.9
4,421,581	-				-0.6
4,421,581	-				+1.4
4,421,581	-				+0.8
4,421,656	+				-0.3
4,421,662	-				+0.5
4,421,769	+				+0.5
4,421,865	+		MIT1002_03938	0.34	+0.7
4,421,865	+		MIT1002_03938	0.34	-0.3
4,421,866	+		MIT1002_03938	0.35	-0.4
4,421,897	+		MIT1002_03938	0.44	-0.5
4,421,906	-		MIT1002_03938	0.47	+1.0
4,422,031	-		MIT1002_03938	0.87	-1.7
4,422,047	+				+2.3
4,422,063	-				-0.4
4,422,063	-				+1.1
4,422,206	-				+1.1
4,422,257	+				+0.4